Pairwise Alignments

Query, 306 a.a., ABC transporter permease from Dickeya dianthicola 67-19

Subject, 306 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  249 bits (635), Expect = 7e-71
 Identities = 129/276 (46%), Positives = 187/276 (67%), Gaps = 11/276 (3%)

Query: 39  FTLALIVGL-ALLAPWISPQNPYDLTQLMIMDNRLPPGSAGMGGLTYWLGSDDQGRDLLS 97
           F L +++ + ALLAP I+P NP+D   + IMD   PP     G   + LG+D+QGRDL S
Sbjct: 27  FALFVVLAMSALLAPVIAPHNPFDGANIDIMDAETPPLWKDGGNPAFLLGTDNQGRDLFS 86

Query: 98  AMLYGTRTSLTVGVSSALAALAIGMTAGMLSAWQGGKTDALLMRIVDIQLSFPPLLIALI 157
           A+LYG R SL +GV +      IG+  G+LS +   + D +LMRI D+QLSF   ++A+ 
Sbjct: 87  AILYGMRVSLLIGVGAVAMQACIGIMVGLLSGYGSRRLDNILMRIADVQLSFSSYMVAIF 146

Query: 158 LLAVL----GQG------VDKIILALVITQWAYYARTIRASALLESRRNYVDAARGMAFS 207
           L A++    G G      V  ++L + + +W  YART+RAS L E ++ YV+AAR +   
Sbjct: 147 LGAIVQMTFGVGRYEQVAVPFLVLVIGLAEWPQYARTVRASVLAEKKKEYVEAARVIGLR 206

Query: 208 TPRILFRHMLPNCLPPLIVVATLRIAYAIMLEATLSFLGIGLPITEPSLGLLIANGFDYL 267
             RI++RH+LPN L P++V++T+++A AIM EA LSFLG+G+P+T+PSLG LI +GF Y 
Sbjct: 207 PFRIMWRHILPNTLTPVLVISTVQVANAIMSEAALSFLGLGMPVTKPSLGSLIKSGFQYF 266

Query: 268 LSGDYWISLFPGVMLLLLIVAINLIGDALRDALNTR 303
            SG +WI+LFPGV+L+LL+++INL+GD LRD LN +
Sbjct: 267 FSGSWWITLFPGVVLILLVLSINLLGDWLRDFLNPK 302