Pairwise Alignments

Query, 246 a.a., amino acid ABC transporter permease from Dickeya dianthicola 67-19

Subject, 243 a.a., Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (NCBI) from Rhodospirillum rubrum S1H

 Score =  256 bits (653), Expect = 4e-73
 Identities = 121/245 (49%), Positives = 177/245 (72%), Gaps = 4/245 (1%)

Query: 1   MSIDWNWGIFLQSAPFGNTTYLGWIISGLQVTVSLSLCAWVIAFLLGSLLGILRTVPNRL 60
           M+  WNW IF Q +P GN TYL  ++SGL  T++ +L AW +A +LG ++GI+RT+P++ 
Sbjct: 1   MNYTWNWSIFWQLSPEGNGTYLDTLMSGLYWTMATALAAWALALVLGGMIGIMRTLPSKG 60

Query: 61  LSGIGTCYVELFRNVPLIVQFFSWYLVVPELLPANIGMWFKAELDPNIQFFLSSMFCLGM 120
           L  +G  YVE+FRN+PL+VQ F WY V+PELLP + G+W K   D     F +S+  +G 
Sbjct: 61  LQRLGAAYVEVFRNIPLLVQLFLWYFVLPELLPPSWGLWLKQIPDAP---FYTSVVGIGC 117

Query: 121 FTAARVCEQVRAGIQSLPRGQKAAGLAIGLTLPQTYRYVLLPNAYRVVVPPLTSEMLNLV 180
           FT+ARV EQ+RAGI +LPRGQ  A  A+GLTLPQTYRY+LLP A R+V+PPLTSE LN V
Sbjct: 118 FTSARVAEQIRAGITTLPRGQAMASTALGLTLPQTYRYILLPMALRIVLPPLTSEFLNTV 177

Query: 181 KNSAIASTIGLVDMAAQAGKLLDYSAHAYESFSAITLAYIGINAIIMLIMQIVERKTRLP 240
           KN+++A TI L+++ A+   + ++S   +E+F+A TL Y+ IN +++ +M+++E +  +P
Sbjct: 178 KNTSVALTISLMELTARTRAMQEFSFQVFEAFAAATLIYVLINVVVVAVMRVIEHRVAVP 237

Query: 241 G-NLG 244
           G N+G
Sbjct: 238 GFNVG 242