Pairwise Alignments

Query, 588 a.a., SmdA family multidrug ABC transporter permease/ATP-binding protein from Dickeya dianthicola 67-19

Subject, 585 a.a., lipid A ABC transporter ATP-binding protein/permease MsbA from Pantoea sp. MT58

 Score =  274 bits (700), Expect = 8e-78
 Identities = 175/558 (31%), Positives = 304/558 (54%), Gaps = 15/558 (2%)

Query: 21  AVILLIVIAILQLLPPRLVGIIVDGVTQRQMATTTVLWW----IGGILLVALLTYLLRYF 76
           A + LIV A +  L   L+  ++D V  R      +L W    I G++LV  ++  +  +
Sbjct: 29  AGVALIVNAAIDPLMLTLLKTLLDDVIGRN--NHGILIWMPLVIIGLILVRGVSGYISSY 86

Query: 77  WRIWLFGAAYQLAVELREDFYRQLSRQHPAFYLRHRTGDLIARATNDVDRVVFAAGEGVL 136
              W+ G   ++ + LR   +  +     AF+ +  TG L++R + D ++V  ++   ++
Sbjct: 87  CISWVSG---KVVMALRCRLFSHMMGMPVAFFDQQSTGTLLSRISYDCEQVASSSSGSLV 143

Query: 137 TLV--DSLVMGCAVLVVMCTQLSWQLTLMALAPMPLMAVIIKRYGTQLHQRFKDAQAAFS 194
           T+V   + ++G   L VM    SWQL+L+ L   P++++ I+    +     K+ Q    
Sbjct: 144 TVVREGASILG---LFVMMFYYSWQLSLILLVLAPIVSLAIRIVSRRFRGISKNMQNTMG 200

Query: 195 SLNDHAQESLTSIRMIKAFGLEDHQSGSFAQVAADAGQKNMRVARVDARFDPTIYIAVAF 254
            +  HA++ L   + +  FG +  ++  F QV+ +  ++ M++    +  DP I +  + 
Sbjct: 201 QVTSHAEQMLKGHKEVLMFGGQQVETTRFEQVSNNMRRQGMKMVSATSLSDPIIQLLASS 260

Query: 255 SNLLAVGGGSWMVINGSMTLGSLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRQL 314
           +    +   S+  +  ++T GS+++    + +++ P+ +L  +    +RG AA   +  +
Sbjct: 261 ALAFVLYAASFPSVMATLTAGSISAVFSAMLMLMRPLKSLTNVNAQFQRGMAACQTLFAI 320

Query: 315 LSEAPVVVDGSQPLPAKSGTLAAEIAAFHYPGHSARVLNDVRFTLTPGKTLGLCGPTGSG 374
           L       +G+  +   +G +      F YPG     L  +  T+  GKT+ L G +GSG
Sbjct: 321 LDTEQEKDEGTYVVERATGNIEFRDVTFTYPGSETPALEHINLTIPAGKTVALVGRSGSG 380

Query: 375 KSTLLALLQRYFDVEQGQITYHQQPLHQIRLDELRSRFAVVGQTPFLFSDSVANNIALGR 434
           KSTL +LL R++D++ G+I      L    L  LR + A+V Q   LF+D+VANNIA  R
Sbjct: 381 KSTLASLLTRFYDIDSGEILLDGHALRDYTLASLREQVALVSQHVHLFNDTVANNIAYAR 440

Query: 435 PDA-SQQQIEEAARLANVHDDILRLPQGYQTEVGERGVMLSGGQKQRIAIARALLLEAEV 493
            D  S++ IE+AA++A+  + I ++  G  T +GE GV+LSGGQ+QRIAIARALL ++ +
Sbjct: 441 TDVFSREAIEKAAQMAHAMEFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPI 500

Query: 494 LVLDDALSAVDGRTEHQILSNLRQWGQKRTLIISAHRLSALVDADEILVLQQGHVAQRGA 553
           L+LD+A SA+D  +E  I S L    Q RT +I AHRLS +  ADEIL++++G + +RG+
Sbjct: 501 LILDEATSALDTESERAIQSALETLQQNRTTLIIAHRLSTIEKADEILLVEEGRIVERGS 560

Query: 554 HEQLSQQAGWYRDMYRYQ 571
           H+QL Q+ G Y  +Y+ Q
Sbjct: 561 HQQLLQKNGAYTRLYKMQ 578