Pairwise Alignments

Query, 299 a.a., site-specific tyrosine recombinase XerD from Dickeya dianthicola 67-19

Subject, 298 a.a., tyrosine recombinase XerD from Pseudomonas stutzeri RCH2

 Score =  343 bits (879), Expect = 4e-99
 Identities = 176/298 (59%), Positives = 217/298 (72%), Gaps = 1/298 (0%)

Query: 1   MQKQDQALIEQFLDALWLERNLAENTLSSYRNDLRSLADWLAHHECSLLQAQPSDLQDFL 60
           M   D ++I+++LDALWLE+ LA+N+  +YR+DL     WL+     L  A    + D L
Sbjct: 1   MPALDDSVIDRYLDALWLEKGLADNSREAYRSDLALFNGWLSERGVRLAVAGREIILDHL 60

Query: 61  AERLEGGYKATSSARLLSAMRRLFQYLYREKQRTDDPSAPLSSPKLPQRLPKDLTEAQVD 120
           A RL  GYKA S+AR LS +R  ++YL RE +   DP+  +  P+L + LPK L+EA V+
Sbjct: 61  AWRLNNGYKARSTARFLSGLRGFYRYLLREGEIAVDPTLRVDLPRLGRPLPKALSEADVE 120

Query: 121 ALLAAPVTDQPIELRDKAMLELLYATGLRVSELVGLTISDVSLRQGVVRVIGKGNKERLV 180
           ALLAAP    PI LRD+AMLE+LYA GLRV+EL+ LT+  VS+RQGV+R  GKGNKERLV
Sbjct: 121 ALLAAPDLGDPIGLRDRAMLEVLYACGLRVTELISLTLEQVSMRQGVLRTFGKGNKERLV 180

Query: 181 PLGEEAVYWLEQYLEYSRPWLLNGQTLDVLFPSNRAQQMTRQTFWHRIKHYATLASIDSN 240
           PLG+EA++WLE+Y    R  LL G+  DVLFPS R  QMTRQTFWHRIK +A +A I + 
Sbjct: 181 PLGDEALHWLERYQREGRDELLGGKARDVLFPSLRGDQMTRQTFWHRIKLHAKVAGI-AT 239

Query: 241 KLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRLLHQQHHPR 298
            +SPH LRHAFATHLLNHGADLR VQMLLGHSDLSTTQIYTH+A  RL+ LH QHHPR
Sbjct: 240 SISPHTLRHAFATHLLNHGADLRTVQMLLGHSDLSTTQIYTHIARARLQELHAQHHPR 297