Pairwise Alignments

Query, 628 a.a., DEAD/DEAH family ATP-dependent RNA helicase from Dickeya dianthicola 67-19

Subject, 499 a.a., ATP-dependent RNA helicase from Sinorhizobium meliloti 1021

 Score =  305 bits (782), Expect = 2e-87
 Identities = 194/503 (38%), Positives = 285/503 (56%), Gaps = 23/503 (4%)

Query: 6   TSFASLGLSAPILSALSELGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLL 65
           T+FA LGLS  +LSA+++ GY  P+PIQ   IP  L  RD+LG+AQTG+GKTA+F LP+L
Sbjct: 2   TNFADLGLSQKVLSAVTDAGYTIPTPIQVGAIPPALQRRDILGIAQTGTGKTASFVLPML 61

Query: 66  NNI---KAELKAPQLLVLAPTRELAVQVAEACNEFSKHMQGVNVVALYGGQRYDVQLRAL 122
             +   +A  + P+ L+L PTRELA QVAE  +++ K+ + +N+  L GG  +D Q R L
Sbjct: 62  TLLEKGRARARMPRTLILEPTRELAAQVAENFDKYGKNHK-LNIALLIGGVSFDEQDRKL 120

Query: 123 RQGPQIVVGTPGRLLDHLKRGTLDLSNLSGLVLDEADEMLRMGFIEDVENIMAQIPAEHQ 182
            +G  +++ TPGRLLDH +RG L ++ +  LV+DEAD ML MGFI D+E I   IP   Q
Sbjct: 121 ERGADVLICTPGRLLDHCERGKLLMTGVEILVIDEADRMLDMGFIPDIERIAKLIPFTRQ 180

Query: 183 TALFSATMPEAIRRITRRFMKDPQEVRIQSSVTTRPDISQSYWTVYGMR-KNEALIRFL- 240
           T  FSATMP  I+++  RF+++P+ + +    +T   ++Q +   +G   +  A++R L 
Sbjct: 181 TLFFSATMPPEIQKLADRFLQNPERLEVARRSSTAITVTQRFVAAHGKDYEKRAVLRELI 240

Query: 241 -EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDIL 299
              ED   AIIF   K    E+  +L+R G++  AL+GDM+Q  R   L   KDG + +L
Sbjct: 241 RSQEDLKNAIIFCNRKKDVAELFRSLDRHGFSVGALHGDMDQRSRMAMLANFKDGNIKLL 300

Query: 300 IATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRN 359
           +A+DVAARGLD+  +S V N+D+P+ +E YVHRIGRTGRAGR+G A   V  RE +    
Sbjct: 301 VASDVAARGLDIPDVSHVFNFDVPIHAEDYVHRIGRTGRAGRSGAAFTIVTKRETKFSDA 360

Query: 360 IERTMKLTIPEVDLPNAELLGQRRLAQFAAKVQQQLESSDLDMYRALLGKLRPQEELDIE 419
           IE   KL   +V+  N +L          +++ + +ES D    R   G+   + E   +
Sbjct: 361 IE---KLIGQKVEWFNGDL----------SELPEPMESHDSRRDRGSDGRKDRKRERPGK 407

Query: 420 TLAAALLKMAQGE--RPLVLPPESAVERRPRREFRERDERFERRGDRNERAPRSSDERPA 477
             A      A G     L   PE     +  R    +D R   R DR  RA  ++++   
Sbjct: 408 VHADRKPVTASGNNTEELETVPERVDAVKIERNADSKD-RHNGRSDRPGRAQNAANDDNR 466

Query: 478 RRERRDVGEMDLYRIEVGRDDGV 500
            R +R+  + D     VG  D +
Sbjct: 467 DRRQRNRRDHDDGPTPVGFGDDI 489