Pairwise Alignments

Query, 353 a.a., outer membrane-stress sensor serine endopeptidase DegS from Dickeya dianthicola 67-19

Subject, 385 a.a., Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain from Pseudomonas stutzeri RCH2

 Score =  247 bits (630), Expect = 4e-70
 Identities = 156/365 (42%), Positives = 212/365 (58%), Gaps = 38/365 (10%)

Query: 10  LFGVIVAGILLLAIPTLRSNQGLIKSGD----------NNSQETPVSYYQGVRRAAPAVV 59
           L G++VA +++   P L      IK  D             Q+ P SY   V  AAPAV 
Sbjct: 13  LVGLLVALLIIQRYPQLVG----IKERDIGLRQAPLVATTPQQGPYSYANAVAGAAPAVA 68

Query: 60  NVYN-------QANDPTAKNELNIR--------------TLGSGVIMNNKGYILTNKHVI 98
           N+Y        +   P +K+ L  R              +LGS VIM+ +GY+LTN HV 
Sbjct: 69  NLYTTKVIEKTEQQAPLSKDPLFQRFFNDNLPRQRRMESSLGSAVIMSPEGYLLTNNHVT 128

Query: 99  SNAEQIVVTLQDGRIFEALLVGSDSLTDLAVLKIEGANLPEIPINPKRVFHVGDVVMAIG 158
           +NAEQIVV L+DGR   A ++GSD  TDLAVLKI+ A+LP I +       VGDV +AIG
Sbjct: 129 ANAEQIVVALKDGRETLARVIGSDPETDLAVLKIDLADLPAITVGHSDRIRVGDVTLAIG 188

Query: 159 NPYNLGQTVTQGIVSATGRVGLSSSGRQNFLQTDASINRGNSGGALVNTLGELVGINTLS 218
           NP+ +GQTVT GI+SATGR  L  +  ++F+QTDA+INRGNSGGALV+  G L+GINT  
Sbjct: 189 NPFGVGQTVTMGIISATGRNQLGLNTYEDFIQTDAAINRGNSGGALVDAEGNLIGINTAI 248

Query: 219 FDKSNDGGTPEGIGFAIPVALASKIMNKLIRDGRVIRGYIGISGAQRERLGNQVTGLERL 278
             +S   G  +GIGFAIPV LA ++M  +I  G+VIRG++G+      +   +  G E  
Sbjct: 249 ISES---GGSQGIGFAIPVKLALEVMKSIIDHGQVIRGWLGVEVQSLTQELAESFGQEGR 305

Query: 279 QGIVVNRVETGGPADKAGIKEGDLLLEVNNKPARSVIETMDQVAEIRPGSVIPVVIFRDN 338
            GIVV  V   GPA +AG++ GDL+L ++   +     +M+QVA  RPG  I + I R+ 
Sbjct: 306 PGIVVAGVYRDGPAARAGLQPGDLILSIDGVQSADGRSSMNQVARARPGDKIDIDILRNG 365

Query: 339 QEIKL 343
           + + L
Sbjct: 366 KPLTL 370