Pairwise Alignments

Query, 1197 a.a., urea carboxylase from Dickeya dianthicola 67-19

Subject, 673 a.a., 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) from Shewanella amazonensis SB2B

 Score =  363 bits (933), Expect = e-104
 Identities = 188/446 (42%), Positives = 283/446 (63%), Gaps = 4/446 (0%)

Query: 1   MFERVLIANRGAIAVRIIRTLKKMGVKAIVVYAEADRHSLHVRQADEAWSLGDGPVRDTY 60
           MF ++LIANRG IA R+IRT + MG+K + VY++ADR + HV  ADE++ LG+     +Y
Sbjct: 1   MFNKLLIANRGEIACRVIRTARDMGIKTVAVYSDADRDARHVALADESFYLGESAPASSY 60

Query: 61  LNQDKLLHIAAESGAQAIHPGYGFLSENAGFVTRCEQAGLVFLGPTVAQMTAFGLKHQAR 120
           L  + ++ IA + GA+AIHPGYGFLSENA F   CE +G+ F+GP    + A G K  A+
Sbjct: 61  LRGELIIDIAKKCGAEAIHPGYGFLSENAAFARACEASGIAFVGPGSDAIDAMGSKSAAK 120

Query: 121 ALAQQNAVPLLPG-SGLLTSLDSACEQARRIGYPVMLKSTAGGGGIGMQRCNDEDQLVDA 179
            + ++  VPL+PG  G   S  +   +A++IGYP+++K+  GGGG GM+    E +L  A
Sbjct: 121 LIMEKAGVPLVPGYHGDDQSDATLLAEAKKIGYPLLIKAAYGGGGKGMRIVESESELKAA 180

Query: 180 FTRVKRLAGNNFADDGVFLEKFIARARHIEVQVFGDGQGNVIALGERDCSAQRRNQKVIE 239
               +R A ++F +D + +E+++ + RH+EVQVF D QGN + L +RDCS QRR+QKV+E
Sbjct: 181 IDSARREAASSFGNDKLLMERYLRQPRHVEVQVFADSQGNCVYLSDRDCSIQRRHQKVVE 240

Query: 240 ETPAPHLGDGVRAELQATAIRLCQAVNYRSAGTVEYVYDDSSKQFWFLEVNTRLQVEHGV 299
           E PAP L D +R ++   A+   +A++YR AGTVE++  D    F+F+E+NTRLQVEH V
Sbjct: 241 EAPAPGLPDSLRKQMGEAAVAAAKAIDYRGAGTVEFLL-DVDMSFFFMEMNTRLQVEHPV 299

Query: 300 TEMVYGVDIVQWMVTLGADCLPPLHTLTATPRGHAIQVRLYAEDPAKQFQPCAGLLSNVS 359
           TEMV G D+V+W + + A    PL        GHA +VR+YAEDP  +F P +G L+ + 
Sbjct: 300 TEMVTGQDLVKWQLLVAAGAQLPLEQHEIQIHGHAFEVRIYAEDPNNEFLPASGKLTFLR 359

Query: 360 FPDALPGLTLRIDHWLDSGCEVSPFYDPMLAKVLVHGDDRGAALDGMAQALNATSLYGIE 419
            P+  P   +RID  +     +S +YDPM+AK++V  + R  AL  + +AL    + G++
Sbjct: 360 EPE--PSRHVRIDSGVRENDVISNYYDPMIAKLIVWDESRPRALARLTRALGDYRVGGLK 417

Query: 420 TNLDWLRHLLTLPAVRRGEIITATLG 445
            N+++L ++   PA  +    T  +G
Sbjct: 418 HNIEFLSNIAEHPAFAQANFSTDFIG 443



 Score = 57.8 bits (138), Expect = 3e-12
 Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 11/110 (10%)

Query: 1092 DGELARWRADGQFTF----DSSLQETVTDDEVIPPHGYGVESQVAGSVWQWLVAPGDTVS 1147
            DG L  + + G + F       L+ET + ++ +       ++ + G+V   LVA GD VS
Sbjct: 562  DGGLTVFLSSGSYHFREVLGQVLEETASSEDKL-------KAPMNGTVVTHLVAAGDKVS 614

Query: 1148 AGQVVGILESMKMEIPITAPVAGIIHTLHRQPGHQVQAGQLLMVIEPAGA 1197
            AGQ + ++E+MKME  I AP  G++      PG  V  G LL+ +E A A
Sbjct: 615  AGQGLLVMEAMKMEYTIEAPFDGVVSEFFFAPGELVSDGTLLLALEMADA 664