Pairwise Alignments

Query, 614 a.a., ATP-dependent DNA helicase RecQ from Dickeya dadantii 3937

Subject, 636 a.a., ATP-dependent DNA helicase from Sinorhizobium meliloti 1021

 Score =  530 bits (1366), Expect = e-155
 Identities = 282/595 (47%), Positives = 381/595 (64%), Gaps = 9/595 (1%)

Query: 19  MQVLRETFGYQQFRPGQQAIINAAVSGRDCLVIMPTGGGKSLCYQIPALVLEGLTLVVSP 78
           + +L+  +GY  FR  QQA+++  V+G D +V+ PTG GKSLC+QIPAL   G+ +VVSP
Sbjct: 38  LDLLKRIYGYSTFRGQQQAVVDHVVAGGDAVVLFPTGAGKSLCFQIPALCRRGVGIVVSP 97

Query: 79  LISLMKDQVDQLQAYGVAAACLNSTQTREQQQAVFSACRRGELKLLYIAPERLTTDGFLE 138
           LI+LM+DQV+ L+  G+ AA LNS+ TR++  AV  A  R EL LLY+ PER  TDGF E
Sbjct: 98  LIALMRDQVEALKQLGIRAAALNSSLTRDEAIAVRRALSRDELDLLYVTPERAVTDGFAE 157

Query: 139 QLTHWNTTLIAIDEAHCISQWGHDFRPEYRALGQIKQQLPALPIVALTATADETTRQDIA 198
            +   +  L AIDEAHC+SQWGHDFRPEYR LG + ++ P +P +ALTATAD  TR D+ 
Sbjct: 158 MIADADIALFAIDEAHCVSQWGHDFRPEYRGLGCLAERFPGVPRIALTATADPHTRDDMI 217

Query: 199 RLLDLRDPLINISSFDRPNIRYTLVEKFKPLDQLWLFVQGQRGKSGIVYCNSRAKVEDLC 258
             L L    +  SSFDRPNI Y +VE+ +P  QL  F+   +  SGIVYC SRAKVED  
Sbjct: 218 ERLGLGGARVFASSFDRPNIAYEIVERDQPRQQLLRFLSRFKDASGIVYCLSRAKVEDTA 277

Query: 259 ARLQNRGLSVGAYHAGLDNDRRSQVQEAFLRDDLQVVVATVAFGMGINKPNVRFVVHFDI 318
             L  +G+    YHAG++   R   Q+AFL+++   +VATVAFGMGI+KP+VR+V H D+
Sbjct: 278 EWLDAQGIRALPYHAGMERAARDAHQDAFLKEENLCLVATVAFGMGIDKPDVRYVAHLDL 337

Query: 319 PRNIESYYQETGRAGRDGLPAEAALFYDPADMAWLRRCLEEKPAGVQLD-IERHKLNAMG 377
           P ++E+YYQETGRAGRDGLP+E  + Y  AD+   RR ++E  A  ++  IER KLN++ 
Sbjct: 338 PGSVEAYYQETGRAGRDGLPSEVWMAYGMADVIQRRRMIDEGGAPEEIKRIERAKLNSLL 397

Query: 378 AFAEAQTCRRLVLLNYFGENRQQACGNCDVCLDPPRRYDGLVDAQKALSCVYRVGQRFGI 437
           A  E   CRR  +L +FGE     CG+CD CL P   +DG   A KAL+ VYR G+RFG 
Sbjct: 398 AICETAGCRRQAILAHFGEAHPGGCGHCDTCLKPVETWDGTEAAIKALAAVYRTGERFGT 457

Query: 438 GYIAEVLRGANNQRIREFGHDKLPVYGLGKDKTQEQWVSILRQLIHLGLLAQNIAHHSAL 497
           G++ +VL G+ N++   FGH  +PV+G GKD     W SI RQL+  GL++ + A   AL
Sbjct: 458 GHLIDVLTGSVNEKTERFGHVDMPVFGAGKDLPARTWQSIFRQLLAAGLISVDHAAFGAL 517

Query: 498 QLTESARPVLRGDVPLQLAVPRVIS-------LSKPRASQKTYGGNYDRKLFAKLRKLRK 550
           +L   AR V R +  +     R  S        SKP + +    G+ D +LF +LR  R 
Sbjct: 518 KLEPEARSVFRRERQVLFRKDRPSSGKAKTARGSKPASERSDLAGS-DLELFERLRSERL 576

Query: 551 SIADEDNIPPYVVFSDATLLEMAELLPVTASELLAVNGVGQRKLERFGTPFMTLI 605
           S+A E ++PPYVVF D TL+ +A+  P    ELL V G+G+ K ER+G  F+ +I
Sbjct: 577 SLAREMDVPPYVVFPDTTLIALAKRRPRDFEELLDVPGIGESKRERYGEAFLAVI 631