Pairwise Alignments

Query, 614 a.a., ATP-dependent DNA helicase RecQ from Dickeya dadantii 3937

Subject, 629 a.a., ATP-dependent DNA helicase RecQ (NCBI) from Rhodospirillum rubrum S1H

 Score =  527 bits (1357), Expect = e-154
 Identities = 283/611 (46%), Positives = 381/611 (62%), Gaps = 16/611 (2%)

Query: 4   ADVLNADVLNKETLAMQVLRETFGYQQFRPGQQAIINAAVSGRDCLVIMPTGGGKSLCYQ 63
           AD ++AD       A  +L + +G++ FRPGQ+AII A + G D L +MPTG GKSLCYQ
Sbjct: 23  ADAVSADP------ARVLLADIWGFKDFRPGQEAIIRAVLGGEDVLAVMPTGSGKSLCYQ 76

Query: 64  IPALVLEGLTLVVSPLISLMKDQVDQLQAYGVAAACLNSTQTREQQQAVFSACRRGELKL 123
           +PAL+ +G+TLVVSPLI+LM+DQV QL A GVAA  LNS+   +  + V    R G LKL
Sbjct: 77  LPALMRQGVTLVVSPLIALMRDQVAQLDALGVAAGALNSSIDMDGYRRVMDGLRGGRLKL 136

Query: 124 LYIAPERLTTDGFLEQLTHWNTTLIAIDEAHCISQWGHDFRPEYRALGQIKQQLPALPIV 183
           LY+APERL     L  L     T +AIDEAHC+SQWGHDFRP+Y  LG++++ L  +  V
Sbjct: 137 LYVAPERLARPDTLSLLRDSGVTALAIDEAHCVSQWGHDFRPDYLCLGKVREDLGGVQTV 196

Query: 184 ALTATADETTRQDIARLLDLRDPLINISSFDRPNIRYTLVEKFKPLDQLWLFVQGQRGKS 243
           A TATAD  TR DIA  L    P + I  FDRPN+R  +  K     +++ FV    G+S
Sbjct: 197 AFTATADAATRDDIAGRLFPAPPRLFIGGFDRPNLRLAMRPKGDTRRRMFEFVAAHTGES 256

Query: 244 GIVYCNSRAKVEDLCARLQNRGLSVGAYHAGLDNDRRSQVQEAFLRDDLQVVVATVAFGM 303
           G++YC SRA+ E+L   L+  G     YHAGLD   R   Q+AFL +D  V+VATVAFGM
Sbjct: 257 GVIYCGSRARTEELAEGLRGAGHRALPYHAGLDKPVRDANQDAFLAEDGLVMVATVAFGM 316

Query: 304 GINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAALFYDPADMAWLRRCLEEKPAG 363
           GI+KP+VRFV H D+PR+IE+YYQE GRAGRDGL A+   FY   D+   R  +EE  AG
Sbjct: 317 GIDKPDVRFVCHADMPRSIEAYYQEIGRAGRDGLAADTLTFYGLDDVRLHRMRIEESQAG 376

Query: 364 -VQLDIERHKLNAMGAFAEAQTCRRLVLLNYFGENRQQACGNCDVCLDPPRRYDGLVDAQ 422
             Q  +E  +LNA+ A  EA  CRR  LL YFGE R + CGNCD+C++    +DG ++AQ
Sbjct: 377 DEQKRVEIQRLNALLALCEAPRCRRQTLLGYFGE-RTEPCGNCDLCINGVESFDGTIEAQ 435

Query: 423 KALSCVYRVGQRFGIGYIAEVLRGANNQRIREFGHDKLPVYGLGKDKTQEQWVSILRQLI 482
           KA+S + R GQRF   ++  +L G     I ++GHDKLP +G+GKD T+  W SI RQ+ 
Sbjct: 436 KAMSAMLRTGQRFATEHLINILVGTQTDAITQYGHDKLPTFGVGKDHTRNVWRSIFRQIS 495

Query: 483 HLGLLAQNIAHHSALQLTESARPVLRGDVPLQLAVPRVISLSKPRASQKTYGGNY----- 537
             GL++ +IA+H    +TE+ R VLRG   + L    + +  +     K    +      
Sbjct: 496 AGGLISLDIANHGRWLMTEAGRAVLRGQAGVALRSDVLEAAGRGERKDKERRASAPAVQL 555

Query: 538 ---DRKLFAKLRKLRKSIADEDNIPPYVVFSDATLLEMAELLPVTASELLAVNGVGQRKL 594
              DR LF  LR  R+ +A  +N+P YVVF+D TL+E+A   P +   +  ++G+GQ KL
Sbjct: 556 EADDRALFDALRAKRQELARAENVPAYVVFADRTLIELATKRPPSLDAMREIHGIGQSKL 615

Query: 595 ERFGTPFMTLI 605
            R+G  F+ +I
Sbjct: 616 ARYGAAFLEVI 626