Pairwise Alignments

Query, 790 a.a., DNA polymerase II from Dickeya dadantii 3937

Subject, 791 a.a., DNA polymerase elongation subunit (family B) from Pseudomonas stutzeri RCH2

 Score = 1121 bits (2900), Expect = 0.0
 Identities = 546/788 (69%), Positives = 646/788 (81%), Gaps = 3/788 (0%)

Query: 4   SPPRQGFVLTRHWQDTPAGVQVECWLATDTGPCRVRLSPQQAVAFVPMRHQARITQLLSG 63
           S  ++GF+LTRHW+DTPAG ++  WLATD GP +V +  Q +VAFVP    A    LL  
Sbjct: 6   SQQQRGFILTRHWRDTPAGTEISFWLATDDGPRQVCVPHQHSVAFVPEEQHALAEPLLRR 65

Query: 64  ERHWQLRPLALKNFHHEPQLGLYCLQYRQLLRLEKKLQEAGIPVYEADIRPPERFLMERF 123
           ER  +LRPLAL +F H P +GLYC  YR+LL   + L++AG+ VYEADIRPPER+LMERF
Sbjct: 66  ERDAELRPLALCDFRHRPVMGLYCRSYRRLLDCARLLRDAGVDVYEADIRPPERYLMERF 125

Query: 124 ITAPVWFSGEETADGLIDQVRLKPAPDYRPPLKTVSLDIETSRHGELYCIGLEGCGQRQV 183
           ITAPV F+       L++  +LKPA DYRP L+ VSLDIET+  G+LY I LEGCGQRQV
Sbjct: 126 ITAPVSFTDAPAGRNLVN-TQLKPASDYRPQLRLVSLDIETTARGDLYSIALEGCGQRQV 184

Query: 184 FMLGPENGNADDAGDLTLEYVASRPQLLEKLNHWLQTYDPDVIIGWNLVQFDLRVLQQHA 243
           +MLGPEN     A D  LEY  SR +LLE+LN W   +DPD IIGWNLVQFDLRVL +H+
Sbjct: 185 YMLGPENAQGT-AVDFALEYCESRRELLERLNAWFAAHDPDAIIGWNLVQFDLRVLHEHS 243

Query: 244 ERYRIPLRLGRGGQEMEWREHGYRQGHFFAGAPGRLIVDGIEALKSATWNFASFSLEFVA 303
           +R ++PLRLGRGG+EMEWREHG R  HFFA   GRLI+DGIEAL+SATW+F SFSLE VA
Sbjct: 244 QRLQVPLRLGRGGEEMEWREHGGRGNHFFAATAGRLIIDGIEALRSATWSFPSFSLENVA 303

Query: 304 QSLLGEGKASDNPYQRLEEIEQRFQQDKPALARYNLKDCELVTRIFEKTHLMPFLLERAS 363
           Q+LLGEGKA DNPYQR+ EI++ F QDKPALARYNLKDCELVTRIF  T L+ FLLERA+
Sbjct: 304 QTLLGEGKAIDNPYQRMAEIDRMFAQDKPALARYNLKDCELVTRIFAHTELLTFLLERAT 363

Query: 364 VTGLAADRSGGSVAAFTHLYLPRMHRAGFVAPNLGEVPPEASPGGYVMDSRPGLYDSVLV 423
           VTGLAADRSGGSVAAF HLY+P MHR GFVAPNLGE   EASPGG+VM+S+PGLY+SVLV
Sbjct: 364 VTGLAADRSGGSVAAFEHLYMPLMHRQGFVAPNLGERQAEASPGGFVMNSQPGLYESVLV 423

Query: 424 LDYKSLYPSIIRTFLIDPIGLVTGLQQPDEQHAVEGFRGAWFSRRHHCLPAIVEGIWHER 483
           LDYKSLYPSIIRTFLIDP+GL+ GL+ P+++ ++ GFRGA FSR  HCLPAIVE +W  R
Sbjct: 424 LDYKSLYPSIIRTFLIDPVGLIEGLRHPNDESSIPGFRGARFSRTRHCLPAIVERVWEGR 483

Query: 484 DLAKQHNNKPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLRGHEIMRQTRSLIEAR 543
           + AK+ +NKPLSQALKIIMNAFYGVLGSSGCRFFD RLASSITLRGHEIMR+TR LIEA+
Sbjct: 484 ETAKREHNKPLSQALKIIMNAFYGVLGSSGCRFFDTRLASSITLRGHEIMRRTRELIEAQ 543

Query: 544 GYQVIYGDTDSTFVWLKRAHSEDDANIIGHELVAYINDWWQQHLHQQHGLTSALEMEYET 603
           G+ VIYGDTDSTFVWL++AHS+ +A  IG ELV +INDWW +HL  ++GL SALE++YET
Sbjct: 544 GHAVIYGDTDSTFVWLRKAHSDGEAACIGRELVQHINDWWCEHLQVEYGLASALELQYET 603

Query: 604 HFHRFLMPTIRGAELGSKKRYAGMTINAQG-EQMVFKGLETVRSDWTPLAQQFQQQLYQR 662
           HF RFLMPTIRGAE GSKKRYAG+     G + MVFKGLETVR+DW+PLAQ+FQQ+LYQR
Sbjct: 604 HFRRFLMPTIRGAEEGSKKRYAGLVTRPDGSDGMVFKGLETVRTDWSPLAQRFQQELYQR 663

Query: 663 VFHREPYQEWVREYVEKTLNGEHDDLLVYRKRLRHKLSDYQRNVPPQVRAARMADDYNRQ 722
           +FHR+P++++VREYV +TL GE DDLL+YRKRLR +L DYQRNVPP VRAAR+AD++N +
Sbjct: 664 IFHRQPHRDYVREYVRRTLAGELDDLLIYRKRLRRRLDDYQRNVPPHVRAARLADEFNER 723

Query: 723 YDRPLQYQSGGWISYVITVNGPEPLENRRSPLDYSHYVEKQLQPVADAILPFIHDDFATL 782
             RP QYQ+GGWISY+ITV GPEPLE R S +DY HYV +QLQPVADAILPF+ DDFA+L
Sbjct: 724 QGRPRQYQNGGWISYLITVAGPEPLETRSSVIDYDHYVTRQLQPVADAILPFVGDDFASL 783

Query: 783 VTGQMGLF 790
           V GQ+GLF
Sbjct: 784 VDGQLGLF 791