Pairwise Alignments

Query, 790 a.a., DNA polymerase II from Dickeya dadantii 3937

Subject, 787 a.a., DNA polymerase II from Vibrio cholerae E7946 ATCC 55056

 Score =  834 bits (2154), Expect = 0.0
 Identities = 432/789 (54%), Positives = 555/789 (70%), Gaps = 12/789 (1%)

Query: 8   QGFVLTRHWQDTPAGVQVECWLATDTGPCRVRLSPQQAVAFVPMRHQARITQLLSGERHW 67
           QGFVLTRH +D     Q+E WLAT +GP ++ +  ++ V F+       + ++ +     
Sbjct: 5   QGFVLTRHARDVAGQTQIELWLATPSGPTQLTIRGERPVFFIEQSASQEVMRIAAELSIT 64

Query: 68  -QLRPLALKNFHHEPQLGLYCLQYRQLLRLEKKLQEAGIPVYEADIRPPERFLMERFITA 126
             L PL+L++F  +P    YC   R    L +KL +A + + EADIR  +RFLMERFI  
Sbjct: 65  PSLAPLSLRSFAGQPLAACYCNTIRDSQILAEKLAQADMLILEADIRLADRFLMERFIQG 124

Query: 127 PVWFSGEETADGLIDQVRLKPAP--DYRPPLKTVSLDIETSRHGELYCIGLEGCGQRQVF 184
            + F+G+ T  G   QV+       DY P L  VSLDIE S  G LY IGL+     +V 
Sbjct: 125 SIEFTGQITDFGHYRQVQQAKCRQGDYLPTLNMVSLDIECSEKGLLYSIGLDSPMDSRVI 184

Query: 185 MLGPENGNADDAGDLTLEYVASRPQLLEKLNHWLQTYDPDVIIGWNLVQFDLRVLQQHAE 244
           M+G       +  +  +++V    QLL+ L  W + +DPDVIIGW++V FD R+L + AE
Sbjct: 185 MIGQP-----EPAETPIQWVEDEYQLLKALIAWFEQFDPDVIIGWSVVDFDFRLLHKRAE 239

Query: 245 RYRIPLRLGRGGQEMEWREHGYRQGHFFAGAPGRLIVDGIEALKSATWNFASFSLEFVAQ 304
            +++ L +GR  Q   +R     Q  F +  PGR+++DGI+ LK+AT++F S+SLE V+Q
Sbjct: 240 FHKLKLTIGRAQQPSFFRTASQTQQGFIS-IPGRVVLDGIDTLKTATYHFRSWSLESVSQ 298

Query: 305 SLLGEGKASDNPYQRLEEIEQRFQQDKPALARYNLKDCELVTRIFEKTHLMPFLLERASV 364
            LLGEGKA  N + R++EI Q F+ DKP+LARYNL+DC LV +IF  THL+ F ++R+ +
Sbjct: 299 ELLGEGKAIHNVHDRMDEINQMFRHDKPSLARYNLQDCVLVNKIFAATHLLDFAIQRSRL 358

Query: 365 TGLAADRSGGSVAAFTHLYLPRMHRAGFVAPNLGEVPPEASPGGYVMDSRPGLYDSVLVL 424
           TG+  DR GGSVAAFT+LYLP++HRAG+VAPNL      ASPGGYVMDS PGLYDSVLVL
Sbjct: 359 TGVELDRIGGSVAAFTNLYLPQLHRAGYVAPNLQPENWVASPGGYVMDSIPGLYDSVLVL 418

Query: 425 DYKSLYPSIIRTFLIDPIGLVTGLQQP---DEQHAVEGFRGAWFSRRHHCLPAIVEGIWH 481
           D+KSLYPSIIR+FLIDP+GL+ GL+ P      HAV GFRG  F R  H LP ++E +W 
Sbjct: 419 DFKSLYPSIIRSFLIDPLGLIEGLKLPIGKQADHAVPGFRGGQFHRTKHFLPEMIEKLWA 478

Query: 482 ERDLAKQHNNKPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLRGHEIMRQTRSLIE 541
            RD AK++  K  SQA+KIIMN+FYGVLGSSGCRFFD RLASSIT+RGHEIM QT+ LIE
Sbjct: 479 ARDEAKRNQEKAFSQAIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQTKRLIE 538

Query: 542 ARGYQVIYGDTDSTFVWLKRAHSEDDANIIGHELVAYINDWWQQHLHQQHGLTSALEMEY 601
           ARGYQVIYGDTDSTFV L   +S+ +A+ IGH LV  IN WW +HL Q++ LTS LE+EY
Sbjct: 539 ARGYQVIYGDTDSTFVALGGQYSQQEADNIGHALVREINQWWTEHLKQEYALTSILELEY 598

Query: 602 ETHFHRFLMPTIRGAELGSKKRYAGMTINAQGEQMVFKGLETVRSDWTPLAQQFQQQLYQ 661
           ETH+ RFLMPTIRG+E GSKKRYAG+  +   EQ++FKGLE+ R+DWTPLAQ+FQ QLYQ
Sbjct: 599 ETHYRRFLMPTIRGSETGSKKRYAGLKGDGDNEQLIFKGLESARTDWTPLAQRFQHQLYQ 658

Query: 662 RVFHREPYQEWVREYVEKTLNGEHDDLLVYRKRLRHKLSDYQRNVPPQVRAARMADDYNR 721
            +FH +  + ++R  VE+TL G+ DD LVY+KRLR +L +YQ+NVPPQVRAARMADD N 
Sbjct: 659 LIFHGQDPESYIRTIVEQTLAGQLDDQLVYQKRLRRRLHEYQKNVPPQVRAARMADDINA 718

Query: 722 QYDRPLQYQSGGWISYVITVNGPEPLENRRSPLDYSHYVEKQLQPVADAILPFIHDDFAT 781
           +  RPLQYQ  G I YVITVNGPEP E  +SP+DY HY++KQL+PVADAILPFI   F  
Sbjct: 719 KLGRPLQYQYRGTIEYVITVNGPEPKEYSKSPIDYQHYIDKQLKPVADAILPFIGKQFDE 778

Query: 782 LVTGQMGLF 790
           L+  Q+GLF
Sbjct: 779 LIAPQLGLF 787