Pairwise Alignments

Query, 601 a.a., long-chain fatty acid--CoA ligase from Dickeya dadantii 3937

Subject, 563 a.a., AMP-dependent synthetase from Vibrio cholerae E7946 ATCC 55056

 Score =  187 bits (476), Expect = 8e-52
 Identities = 149/575 (25%), Positives = 261/575 (45%), Gaps = 61/575 (10%)

Query: 21  QRPDALAFREWAPEQEQQLDWHQVGERIRRIACGLLGLGVDVQERVAIFSDNAINWSLAD 80
           +RP+ +  ++    Q  +  + +V ++  R+   L  LG D  ++VA+ S N   W + D
Sbjct: 29  ERPNEVYLKQIINRQFVEFTYAEVADKALRLVSALRALGADPGDKVALISKNCAEWFICD 88

Query: 81  LALLHLRAITVPLYATSSAAQASFILNEADIRTVFVGGQAQFDLLMSLRDSCPQLRTIIL 140
           LA++    I+VP++ T+ +    + L  ++ + + VG          +    P L +I L
Sbjct: 89  LAMMLGDYISVPIFPTAGSETIDYCLEHSESKILIVGKLDDNKATAHVLAERPNLISISL 148

Query: 141 LDEQIRRRGCDIAISLQEFEEQAELSVWEPVLRQRVADRDLSDLFTLIYTSGTTGEPKGV 200
                 +  C       ++E Q  +   +P   +R    D   L +++YTSGT+G+PKG 
Sbjct: 149 PYPSAAK--C-------QYEFQTLIKQHQPS-EERPTHFD-EKLMSIVYTSGTSGQPKGA 197

Query: 201 MLDYANVAIQLALHDERLQMSEQDVSLCFLPLSHVFERIWSF-FIMHRGAQNVYLRDTNQ 259
           ML Y             + + E D    +LPL+H+ ER++ F   +  G    +    + 
Sbjct: 198 MLTYGAFTWSAQQLINHIGIEENDRLFSYLPLAHITERVYIFGSSIIGGVLTAFPESLDT 257

Query: 260 VRDAMAAVSPTVMCAVPRFYEKVFSAIHEKVAQAPWYRRTLFHWGIAQGNKRCLRRQAGK 319
             + +    PT+  +VPR +      I +K+ Q                          K
Sbjct: 258 FIEDVKMHRPTLFISVPRLWTLFQQRIQDKLPQKKLNILL-------------------K 298

Query: 320 RAGVWNALTYRLADRLVLSRLRQLLGGKVRFLPAAGARLDDNIIAFFQAMGVRIIYGYGL 379
              V + +  +LAD L L + R L  G     PA        ++ +++++G+ I   +G+
Sbjct: 299 IPFVNSLIKRKLADGLGLDQARVLGCGSAPVSPA--------LLEWYRSVGLNITEAWGM 350

Query: 380 TETCATVSC---WEADHYRLGSVGTSLPGIDVRIGEQNEIQVRGAIVMRGYYRRPQETED 436
           TE+ A  +    + AD  ++G+VG + PGI+++I E  EI VR   +  GYY+    T +
Sbjct: 351 TESFAYSTLNYPFRAD--KIGTVGNAGPGIELKIAEDEEILVRSKGLFAGYYKNDTATAE 408

Query: 437 AFTPDGWFKTGDVGEMDANGNLFITERLKDLMKTSGGKYIAPQHLEGALGQDRFIEQVAV 496
           +F  DGW  TGD+G +D+ G L I  R KD  KT+ GK++AP  +E  L +   +E + +
Sbjct: 409 SFNDDGWLHTGDIGSLDSEGYLTIQGRKKDTFKTAKGKFVAPVPIEKKLFEYSRVEMMCL 468

Query: 497 IADARKYVSALIVPCFEALEEYARSINLGYQDRLELLRHSHILSLFEQRLRDMQKEFARF 556
           I         L VP            N  + DR    R +      ++ +  +  E    
Sbjct: 469 IGSGLPAPILLAVP-----------HNFPHFDRARYERTT------QKVIARINSELESH 511

Query: 557 EQVKKFTLLPAPFSQEEGELTPTLKLRRKVIHQRY 591
           EQ+K   ++  P+S + G LTPTLK++R V+ ++Y
Sbjct: 512 EQIKGVLMIKDPWSIDNGILTPTLKIKRHVLEKKY 546