Pairwise Alignments

Query, 601 a.a., long-chain fatty acid--CoA ligase from Dickeya dadantii 3937

Subject, 605 a.a., AMP-dependent synthetase and ligase (NCBI) from Rhodospirillum rubrum S1H

 Score =  263 bits (671), Expect = 2e-74
 Identities = 173/567 (30%), Positives = 281/567 (49%), Gaps = 17/567 (2%)

Query: 41  WHQVGERIRRIACGLLGLGVDVQERVAIFSDNAINWSLADLALLHLRAITVPLYATSSAA 100
           W  V +++  +A  ++  G+   +RV + S+N  +W++ADLA+L   AI VP YAT + A
Sbjct: 47  WASVHDQVIALANAMIDQGLAPGDRVVLASENRPDWTIADLAILAAGAIPVPAYATHTEA 106

Query: 101 QASFILNEADIRTVFVGGQAQFDLLMSLRDSCPQLRTIILLDEQIRRRGCDIAISLQEFE 160
               +L+  +     V      +  +       +   ++++D         +   L    
Sbjct: 107 DHLHVLDNVEAAMAIVSTPLVAERFLRAAARAKRRPLVVMMDFD---DAVVVPAGLTVLA 163

Query: 161 EQAELSVWE----PVLRQRVADRDLSDLFTLIYTSGTTGEPKGVMLDYANVAIQLALHDE 216
             A ++  E    P +  R+   DL+   ++I+TSGT G PKGVML + ++        +
Sbjct: 164 WNAMMAEGEGRGVPAVVHRIQTDDLA---SIIHTSGTGGTPKGVMLAHRSILHNCHGAFK 220

Query: 217 RLQMS--EQDVSLCFLPLSHVFERIWS-FFIMHRGAQNVYLRDTNQVRDAMAAVSPTVMC 273
            L+    E++V L FLPL H +E     FF +  GAQ  +      +   M    PT+M 
Sbjct: 221 LLETIGLEEEVFLSFLPLCHSYEHTTGLFFPISLGAQVYFAEGAETLAANMVEAKPTIMT 280

Query: 274 AVPRFYEKVFSAIHEKVAQAPWYRRTLFHWGIAQGNKRCLRRQAGKRAGVWNALTYRLAD 333
           AVPR YE + + I   V +    +  +F   +  G +R          GV + LT    D
Sbjct: 281 AVPRLYEMMRARILRAVEKEGGLKEKMFREAVDLGRRRM---DDPASLGVKDKLTDAALD 337

Query: 334 RLVLSRLRQLLGGKVRFLPAAGARLDDNIIAFFQAMGVRIIYGYGLTETCATVSCWEADH 393
           +LV   ++   GG+++ + + G  L+ ++  FF+A+G+ ++ GYGLTET   VSC     
Sbjct: 338 KLVRHAVKARFGGRLKAMISGGGPLNPDVGYFFRALGIPVLQGYGLTETAPVVSCNMPKK 397

Query: 394 YRLGSVGTSLPGIDVRIGEQNEIQVRGAIVMRGYYRRPQETEDAFTPDGWFKTGDVGEMD 453
            ++ +VG +L G+D+RI    EI V+G +VM GY+  P+ T     PDGW  TGDVG +D
Sbjct: 398 VKMNTVGPALYGVDIRIASDGEILVKGPLVMDGYWNDPESTRAVLDPDGWLHTGDVGTLD 457

Query: 454 ANGNLFITERLKDLMKTSGGKYIAPQHLEGALGQDRFIEQVAVIADARKYVSALIVPCFE 513
            +G + IT+R KDL+  SGG  I+PQ +EG LG +  I    V  D   ++ ALIVP  E
Sbjct: 458 EDGFIQITDRKKDLIVNSGGHNISPQRVEGILGLEPEIGVGVVFGDRMPHLVALIVPEKE 517

Query: 514 ALEEYARSINLGYQDRLELLRHSHILSLFEQRLRDMQKEFARFEQVKKFTLLPAPFSQEE 573
            L  +++       D   +   + +     + +     +    E+++KF LLP P S E 
Sbjct: 518 FLARWSKETGKP-ADLALVYEDADLRQAIGKAVERANAKLGTVEKIRKFALLPEPMSVEN 576

Query: 574 GELTPTLKLRRKVIHQRYQLEIEAMYA 600
            +LT ++K RR V+  RY   I  +Y+
Sbjct: 577 DQLTHSMKARRHVLRDRYGALIAGLYS 603