Pairwise Alignments

Query, 350 a.a., extracellular solute-binding protein from Dickeya dadantii 3937

Subject, 343 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

 Score = 47.0 bits (110), Expect = 7e-10
 Identities = 68/266 (25%), Positives = 107/266 (40%), Gaps = 42/266 (15%)

Query: 54  DDLSAKYGLKHSDTDMSSAQEIAKFAAEKENASADIG-DVGVAFGPVAVQKGVSQPYKPT 112
           D+     G+K     +SS + +++  AE+ N SAD+    G+     A Q G+ + YK  
Sbjct: 51  DEFEKDTGIKMEYVSLSSGEALSRLKAEQSNPSADVWLGGGIDAFISAQQDGLLEAYKSP 110

Query: 113 TWEQVPDWAKDKDGHWAMAYTGTIAFIVDKQQVKE----IPHSWADL----QKGNYVVTI 164
             + +     ++DG+W      TI  + +   + E     P +W DL     KG  + + 
Sbjct: 111 NAKDIDPLFVEEDGYWTGVSLVTIGILENTDLLSEKGLPEPQTWDDLITDDYKGELIASN 170

Query: 165 GDV-GTASQASSGVLAASFALGGNEKNLKPALDFFAK---LAKEGRLGLTNPAIANIEKG 220
             V GTA     G+L     + G ++       F+     L K G  G  N   A    G
Sbjct: 171 PTVSGTAYFTICGIL----QMYGEDEGWNYLDKFYQNTPFLTKRGS-GPGNLVTA----G 221

Query: 221 EVQVGVVWDFNGLNYRDK--------INKDRFEVLIPSDGSVISGYTTIINKYARHPNAA 272
           E   GV  D +     D         +NK    +  PS  S++SG        A+HP  A
Sbjct: 222 EYAYGVAPDPHTTVIADSELPVKSVFLNK---VIWWPSPVSIVSG--------AKHPENA 270

Query: 273 KLAREYIFSDAGQINLARGYAR-PIR 297
           K+  ++  S  GQ  L +   R P+R
Sbjct: 271 KIFVDWCLSKEGQEVLMQASPRVPVR 296