Pairwise Alignments

Query, 393 a.a., outer membrane protein assembly factor BamB from Dickeya dadantii 3937

Subject, 455 a.a., Pyrrolo-quinoline quinone (NCBI) from Rhodospirillum rubrum S1H

 Score =  149 bits (376), Expect = 2e-40
 Identities = 94/356 (26%), Positives = 167/356 (46%), Gaps = 13/356 (3%)

Query: 46  KVWSRSVGDGTGEFYSNLH-PTWQDSRVYAADRHGTVKALDLNSGEEKWRVDLAEKTGLL 104
           ++WS S+G G       L+ P   D R++  DR  TV+A +  +G+E W+  L  +    
Sbjct: 102 RLWSTSIGAGGTSRDRLLNGPVLADGRIFTIDREATVRAFNAETGKELWQAALPNRDD-- 159

Query: 105 SSNRPALLSGGVAVSGNHVYVGSERAQLFALNADDGALQWQTKVAGEVLSSPVVSDGVVI 164
             +  A L GG+A     ++  +  A++ AL AD G   W+T+V G + ++P V+ G V+
Sbjct: 160 DEDDGAFLGGGLAYDRGRIFASTGFAKVVALRADTGQELWRTEVDGPIRAAPAVNSGRVV 219

Query: 165 IHTSNGMLQALSESDGTIKWTVNLDMPSLSLRGESAPTTAFGAAIVGGDNGRVSAVMINQ 224
           + T +    ALS  DG   W+ +    + ++ G   P    G  ++   +G + A+ +  
Sbjct: 220 VLTVDNQAFALSAVDGHKLWSHSGSPQTATILGAPTPAIDQGVVVIPYSSGELFALRLES 279

Query: 225 GQLIWQQRISQPGGATEIARLNDVDTTPVVAGNVVYALGYNGNLTALDLRSGQITWKREI 284
           G  IW   ++          L D+   PVV  N +Y +G +G +  +DLRSG   W+  +
Sbjct: 280 GTEIWSDAVTAVRRTDATGSLQDIRANPVVDANHLYVIGNSGLMVGMDLRSGARAWQLRV 339

Query: 285 GSVNDFIVDGDRIYLVDQDDRITALNTNGGVVIW-------RQGDLLHRNL--TAPALYN 335
                  + GD ++L+  +  + A+N   G VIW          D L   L  T P L +
Sbjct: 340 AGTQQPWLAGDVLFLISAEAELAAVNAKTGAVIWTTPLPRYESPDSLATPLLWTGPVLAS 399

Query: 336 GYLVVGDAEGYLHWVNTTDGRFVVQQKVDSSGLLSKPVVASDKLLVQAKGGEVYAF 391
             L++G ++   + V+   G+ + + ++  + + S P+VA   L      GE+ A+
Sbjct: 400 DRLIIGSSDASAYAVSPYTGKILGRIELPDA-MASAPIVAKGTLYFLTTTGELVAY 454