Pairwise Alignments

Query, 393 a.a., outer membrane protein assembly factor BamB from Dickeya dadantii 3937

Subject, 476 a.a., beta-barrel assembly machine (BAM) protein BamB from Caulobacter crescentus NA1000

 Score =  120 bits (302), Expect = 6e-32
 Identities = 88/370 (23%), Positives = 152/370 (41%), Gaps = 28/370 (7%)

Query: 48  WSRSVGD-GTGEFYSNLHPTWQDSRVYAADRHGTVKALDLNSGEEKWRVDLAEKTG---- 102
           W +  G  G  +F+    P     R++  D    V A+D  +G+  WR DL    G    
Sbjct: 106 WKKGFGKKGGAKFHVTAPPVASGDRIFVMDGEADVVAMDARTGDTIWRQDLRPAAGPTTK 165

Query: 103 ------LLSSNRPALLSGGVAVS-GNHVYVGSERAQLFALNADDGALQWQTKVAGEVLSS 155
                 +   N      GGVA+   N +YV S    +  ++A  GA+ W    +  + ++
Sbjct: 166 GGFLGLIPKKNDRLGFGGGVALGPDNKLYVASGFRFVAQIDAATGAMGWTQPTSTPIHAA 225

Query: 156 PVVSDGVVIIHTSNGMLQALSESDGTIKWTVNLDMPSLSLRGESAPTTAFGAAIVGGDNG 215
           P V DG V + +++  L   +  +G   WT         +   S P  +    + G  +G
Sbjct: 226 PTVVDGRVFVVSTDNELLTFASENGVPGWTYQALSEPARILAASTPAVSGDTVVSGFASG 285

Query: 216 RVSAVMINQGQLIWQQRISQPGGATEIARLNDVDTTPVVAGNVVYALGYNGNLTALDLRS 275
            + A+    G  +W + +S+      ++ + D+   PV+    V+A+ ++G   A DLRS
Sbjct: 286 ELVALRAANGNDLWNEALSRASRTNALSEIRDIPGRPVIYKGDVFAVSHSGVFAATDLRS 345

Query: 276 GQITWKREIGSVNDFIVDGDRIYLVDQDDRITALNTNGGVVIWRQGDLLHRNL------- 328
           GQ  W   + ++      GD +Y+VD+  ++  ++   G V W Q      NL       
Sbjct: 346 GQARWSLPVTAITTPWAAGDVVYVVDKSGQVICVSRESGSVYWIQDLNDSANLSKKQKKK 405

Query: 329 --------TAPALYNGYLVVGDAEGYLHWVNTTDGRFVVQQKVDSSGLLSKPVVASDKLL 380
                   + P L NG L+   +EG    +N   G      K+ S  LL+ P+   D + 
Sbjct: 406 RAKKPRLWSTPILANGRLITVSSEGEAVALNAKTGAKEKTLKIGSPVLLN-PIAVGDMIY 464

Query: 381 VQAKGGEVYA 390
           +     E+ A
Sbjct: 465 LVTDDAELIA 474



 Score = 43.9 bits (102), Expect = 1e-08
 Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 7/110 (6%)

Query: 72  VYAADRHGTVKALDLNSGEEKWRVDLAEKTGLLS------SNRPALLSGGVAVSGNHVYV 125
           VY  D+ G V  +   SG   W  DL +   L        + +P L S  +  +G  + V
Sbjct: 367 VYVVDKSGQVICVSRESGSVYWIQDLNDSANLSKKQKKKRAKKPRLWSTPILANGRLITV 426

Query: 126 GSERAQLFALNADDGALQWQTKVAGEVLSSPVVSDGVVIIHTSNGMLQAL 175
            SE  +  ALNA  GA +   K+   VL +P+    ++ + T +  L A+
Sbjct: 427 SSE-GEAVALNAKTGAKEKTLKIGSPVLLNPIAVGDMIYLVTDDAELIAV 475