Pairwise Alignments

Query, 415 a.a., extracellular solute-binding protein from Dickeya dadantii 3937

Subject, 409 a.a., substrate-binding protein of a sugar uptake ABC transporter system from Sinorhizobium meliloti 1021

 Score = 53.1 bits (126), Expect = 1e-11
 Identities = 100/427 (23%), Positives = 163/427 (38%), Gaps = 50/427 (11%)

Query: 2   KTKTLTALLLSATAAGQLAAFPVHAAQQLTVWEDIRKSDGIKDAIGDFEKQFNVK----- 56
           K   LT  LL +TA G +AA    AA Q   W  I   D I      + K++  K     
Sbjct: 6   KATFLTLALLGSTALGSVAA---QAADQEISW--IYCGDTIDPIHEKYIKEWEGKNPGWK 60

Query: 57  VNLQEMPYAQQLEKLRLDGPAGIGPDVLVIPNDQLGGAVVQGLIAPLKLDKAEQDSFTDA 116
           V  + + +AQ  +K      AG    +  + +  L       LI P+ + + E+  +   
Sbjct: 61  VTPEVVGWAQCQDKATTLAVAGTPVGMAYVGSRALKEFAENELIVPVPMTEDEKKGYYPN 120

Query: 117 SMAAFRMNNQVYGLPKAVETLVLIYNKDQVSK-------PLASLQEWYDFSRQQQTQN-- 167
            +         +G+P A  T  L +NKD   +       P  +  E   F++Q + +   
Sbjct: 121 IVDTVTFEGTQWGVPIAFSTKALYWNKDLFKQAGLDPEVPPKTWAEEIAFAKQIKEKTGI 180

Query: 168 -KFGLLAK-FDQIYYSWGAIGPMGGYIF---GKKDPGKNDKGGLNPLDIGLNTPGAVEAV 222
             +GL AK FD   + +        +++   GK   G N         I +++P  + A+
Sbjct: 181 AGYGLPAKTFDNTMHQF------MHWVYTNNGKVIDGDN---------IVIDSPEVLAAL 225

Query: 223 TLLRKFYADKLFPAGIIGDNGL--NAIDSLFTEKKAAAVINGPWAFQPYEAAGIHYGVAP 280
               + Y D + P  + G      N I ++F + K   + +G  A    +   +++GVAP
Sbjct: 226 ----QAYKD-ITPFSVEGATAYEQNEIRAIFLDGKVGMIQSGSGAAARLKETKVNWGVAP 280

Query: 281 LPLLPDGKPMSSFLGVKGYVVSTWSKDNTLAQRFIEFINQPRYVKVRYQ---RTGEIPPQ 337
           LPL P  K   + L     VV   +     A  F +FI  P   +  Y+     G  P +
Sbjct: 281 LPLGPSAKGDGTLLITDSLVVFKDTGVEEKAIEFAKFITSPG-PQGEYELQGGAGLTPLR 339

Query: 338 KSMIDDPLIKNDEKASAVAIQAARAVPMPGIPEMGEVWGPANAALELSMTGKQEPKAALD 397
            S   D  +K D          A   P P   +           ++  +TGK EP  AL 
Sbjct: 340 PSPKVDEFVKADPSWKPFIDGIAYGGPEPLFKDFKGFQNTMIEMVQSVVTGKAEPADALK 399

Query: 398 NAVKQIK 404
            A   ++
Sbjct: 400 KAAADLE 406