Pairwise Alignments

Query, 289 a.a., ABC transporter permease from Dickeya dadantii 3937

Subject, 325 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  219 bits (559), Expect = 5e-62
 Identities = 109/262 (41%), Positives = 166/262 (63%), Gaps = 6/262 (2%)

Query: 30  IVMLSLLMLLALFAPWLAPFDPYSQNVMHRLQPPG---PDHW---LGTDGFGRDLLSRVI 83
           ++ + +++++ALFAP +AP  PY  NV     PP       W   LGTD  GRD+LSR+I
Sbjct: 61  LIFIVVIVIVALFAPQVAPHHPYEMNVPMAKMPPAWLEGGQWSYLLGTDALGRDILSRII 120

Query: 84  YGTRPALIMVALILVITIPIGLLIGVGAGYLGGWVDRLLMRLTDIMLALPGLVIALALLA 143
           +G R +L++ A+++ +++  G+ +G+ AG+L GWVD ++MRL DI+L++P L++A+A++A
Sbjct: 121 FGARLSLMVGAVVVTLSLVAGVGLGLLAGFLRGWVDIVIMRLMDIILSVPSLLLAIAIVA 180

Query: 144 VLGTGLLHGALALALTAWPQFARQARAETMALRNSEFLAAARMQGIDGWRLMYGHVLPLC 203
           +LG GL +   A+A+   P + R  RA  M     +++ A+R+ G    RLM   +LP  
Sbjct: 181 ILGPGLENAMAAIAVVVLPHYTRLTRAAVMTEATKDYVTASRVAGASKGRLMVKTILPNT 240

Query: 204 LPGALTRAAMTPGNMILAAAGLGFLGVGAPPPMAEWGAMVAEGSSVMLEQWWVATMPGLA 263
           L   + +A +     IL AA LGFLG+GA PP  EWG M++E    +L  WW+ T PGLA
Sbjct: 241 LAPLIVQATLGFSTAILDAAALGFLGLGARPPRPEWGTMLSEAREFVLSHWWIVTFPGLA 300

Query: 264 IFLTSLTFNMLGNALRDRLDPR 285
           I  T L FN++G+ LRD LDPR
Sbjct: 301 ILFTVLAFNLMGDGLRDALDPR 322