Pairwise Alignments

Query, 343 a.a., polyamine ABC transporter substrate-binding protein from Dickeya dadantii 3937

Subject, 346 a.a., spermidine/putrescine ABC transporter periplasmic substrate-binding protein from Marinobacter adhaerens HP15

 Score = 64.7 bits (156), Expect = 3e-15
 Identities = 75/344 (21%), Positives = 147/344 (42%), Gaps = 22/344 (6%)

Query: 2   LKKFALSALLVVTASQGWAENLTVISFGGTNKDAQDKAFYKPFQATGKGAIEAGEYNGEM 61
           +KK AL+ LL V  +   +E   V++    ++    +   +  + TG   +     + E 
Sbjct: 1   MKKLALAGLLAVGLTGCSSEEPQVLNLYNWSEYMPQEVLDRFTEETGIQVVYTTYDSNEA 60

Query: 62  ARIRAMVQTGQVGWDVVEVEGPELLRGCNEGLFEPLDWKKLGNQADFVKGSVS-----EC 116
              R  +      +D+       + +   E L  P+D  K+    +     V+     E 
Sbjct: 61  MYARLKLLDDSAAYDLAVPSTYYVSKMRQEDLLLPIDRSKIEGFDNLDPELVNLDIDPEN 120

Query: 117 GAGI-FVWSTV-LTYNANKLQQAP-KSWADFWDVKNFPGKRALRKSAKFTLEIALLADGV 173
              + ++W T  L  +   ++  P  +W D W+ + F G+  L    +    + L   G 
Sbjct: 121 QFSVPYLWGTTGLAVDTADIEGEPVTAWEDLWEDR-FDGRVMLTNDMREVFHVGLRVLG- 178

Query: 174 KREEVYSVLAT-PAGVDRAFKKLDQIKSNIQWWESGAQPLQWLVAGDVVMTSAYNGRVAV 232
                YS  +T P  ++ A++KL ++  +++ + S A  + +L  G+  +   +NG   +
Sbjct: 179 -----YSGNSTNPDEIEAAYEKLAELMPSVRTFNSDAPRMPYL-EGEADVGMIWNGEAVM 232

Query: 233 AQKEKPGINIVW-KDGLYD-LDSWAIVKGSKHKALAEQFIAFANQPENQKVFAENIAYGP 290
            +     +  V+ ++G+   LDS+ I K +K+   A QFI+F  QPE   + +E I Y  
Sbjct: 233 GKDTMESLEYVYPEEGIIAWLDSFVIPKNAKNPEAAHQFISFVLQPEISALISEEIGYAT 292

Query: 291 TNGKTTALLDPAISRNLPTAPDNLAQSVQVDTEFWIDHGEELEQ 334
            N     LL   ++ N  + P+    +  ++ EF  D G++  Q
Sbjct: 293 PNLAARDLLPDEVANNRASYPN---ATDMINAEFQTDIGDDALQ 333