Pairwise Alignments

Query, 284 a.a., ABC transporter permease subunit from Dickeya dadantii 3937

Subject, 330 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score = 81.6 bits (200), Expect = 2e-20
 Identities = 55/220 (25%), Positives = 110/220 (50%), Gaps = 4/220 (1%)

Query: 45  LSLRFWQTMLTDEQLWRSFFYSARIALVSALLSAALAYPLAIWLRKPFPGAVT-LRALLK 103
           L+L  ++ ML DE    ++  S RIA +S +L+  + YP+A  + +   G  T L  L+ 
Sbjct: 91  LALSNYKYMLDDEMYVIAYLNSLRIAGISTVLALLIGYPMAYGIARAPKGPRTILLFLVI 150

Query: 104 APLLVPGLTAAFLFVNFISYQGFLNVAMLRLGLTERPIRMQNDANGIGVILLQVWKQMPF 163
            P     L   + ++  +   G LN  ++  G+ ++P+ +      + + +  V+  +PF
Sbjct: 151 LPFWTSFLIRVYAWMGILKGNGLLNTFLIWTGVIDQPLTIMGTEWAVFIGI--VYSYLPF 208

Query: 164 ALLLLSGSVQAIGDTVLDAARNLGAGAWVRFRRIVLPLTLRALQTAMMLIFIGAAGDFSF 223
            +L L  +++ +  ++L+AA +LG   W  F  I LPL++  +    ML+FI + G+F  
Sbjct: 209 MVLPLYATLEKLDPSLLEAAHDLGCRPWKAFLTITLPLSVPGIIAGSMLVFIPSVGEFVI 268

Query: 224 QSVAGPVNLNSMSQLMLRVQQSGAEGWNQAAVVAVMLMLL 263
             + G  +   + +++        + W  A+ VAV ++L+
Sbjct: 269 PELLGGADTFMIGRVLWNEFFLNRD-WPVASAVAVAMLLM 307