Pairwise Alignments

Query, 379 a.a., cytochrome d ubiquinol oxidase subunit II from Dickeya dadantii 3937

Subject, 380 a.a., cytochrome d oxidase, subunit II (cydB) from Pseudomonas stutzeri RCH2

 Score =  434 bits (1115), Expect = e-126
 Identities = 206/380 (54%), Positives = 268/380 (70%), Gaps = 1/380 (0%)

Query: 1   MFDYEVLRFVWWLLIGVLLIGFAVTDGFDMGVGVLVRLMGRNDVERRVMINSIAPHWDGN 60
           MFDYEVL+ VWW+LIGVLLIGFA+TDGFDMG   L+  +G+ D ERRV IN+IAPHWDGN
Sbjct: 1   MFDYEVLKLVWWVLIGVLLIGFALTDGFDMGAMALMPFVGKTDNERRVAINTIAPHWDGN 60

Query: 61  QVWLITAGGALFAAWPMVYAAAFSGFYIAMILVLASLYFRPVGFDYRSKIEDPRWRNMWD 120
           QVW ITAGGALFAAWPMVYA AFSG Y AM+LVL +L+ RPVGFDYRSK+EDPRWR+ WD
Sbjct: 61  QVWFITAGGALFAAWPMVYAVAFSGLYWAMLLVLFALFCRPVGFDYRSKVEDPRWRSAWD 120

Query: 121 WGIFIGSFVPPVVIGVAFGNLLQGVPFHVDEYLRLYYTGNFFQLLNPFGLLAGVVSLSMI 180
           W +F+G  VP +V GVAFGNL  G+PF +DE +R  Y G+FF LLNPF LL G+VSLSM+
Sbjct: 121 WALFVGGAVPALVFGVAFGNLFLGLPFQLDELMRSTYQGSFFALLNPFALLCGIVSLSML 180

Query: 181 VAQGSTYLVMRTSGDLHFRAKKVAQFSSLALTVTFALAGVWVVYGIDGYAVTSVMNTAAE 240
            A G  +L++RT G L  R+++  +  +L   V F  AG+W++ G+ G+   SV +  A 
Sbjct: 181 SAHGGAWLMLRTDGALAERSRQATRLCALVFLVGFLAAGLWLMLGVQGFTQLSVTDPGAA 240

Query: 241 SNP-LHKEVARQAGAWLVNFNNHPVLWAVPLLGVVLPLMTAVMARAEKGAMAFLFSSLSI 299
            NP L K+V +    WL N+  +P+    P+ G++  L+  + +    G  +F+ +SL I
Sbjct: 241 LNPLLDKQVVQDNAGWLGNYGRYPITLIAPVAGILGALLALLGSSRNSGGASFVGTSLMI 300

Query: 300 ACVILTAGIAMFPFIMPSVTVPNVSLTVWDATSSLLTLRVMTVVAIIFVPIVLSYTIWCY 359
              I TAG A+FPF+ PS   P  SLT+WDA SS  TL +M VVA IFVP++L YT+W Y
Sbjct: 301 VGSICTAGFALFPFVFPSSLDPASSLTIWDAVSSKKTLGIMFVVACIFVPLILCYTLWSY 360

Query: 360 YKMFGRITKEHVEQNSHSLY 379
            +M+GR+ ++ +E N H LY
Sbjct: 361 VRMWGRLNQKTIEANPHGLY 380