Pairwise Alignments

Query, 379 a.a., cytochrome d ubiquinol oxidase subunit II from Dickeya dadantii 3937

Subject, 333 a.a., cytochrome d ubiquinol oxidase, subunit II from Marinobacter adhaerens HP15

 Score =  175 bits (444), Expect = 1e-48
 Identities = 110/360 (30%), Positives = 171/360 (47%), Gaps = 39/360 (10%)

Query: 7   LRFVWWLLIGVLLIGFAVTDGFDMGVGVLVRLMGRNDVERRVMINSIAPHWDGNQVWLIT 66
           L  +W  +IG  +I + + DGFD+GVG+L      N+  R  M+NS+AP WDGN+ WL+ 
Sbjct: 6   LPLIWAFIIGFGIIMYVLMDGFDLGVGILFPF-APNEEARDTMMNSVAPVWDGNETWLVL 64

Query: 67  AGGALFAAWPMVYAAAFSGFYIAMILVLASLYFRPVGFDYRSKIEDPRWRNMWDWGIFIG 126
            G  L AA+PMVY+      YI + L+LA L FR V F++R K    R+  +W+W    G
Sbjct: 65  GGAGLLAAFPMVYSIFLPALYIGVFLLLAGLIFRGVAFEFRFKARTSRY--LWNWAFAGG 122

Query: 127 SFVPPVVIGVAFGNLLQGVPFHVDEYLRLYYTGNFFQLLNPFGLLAGVVSLSMIVAQGST 186
           S V     G   G  +QG      E     Y G     L PF +L G+  L+     GST
Sbjct: 123 STVASFAQGAVVGAYIQGF-----ETANGVYVGGALDWLTPFTVLTGLGMLAGYSLLGST 177

Query: 187 YLVMRTSGDLHFRAKKVAQFSSLALTVTFALAGVWVVYGIDGYAVTSVMNTAAESNPLHK 246
           +L+M+T G L   A K+     LA+ V F + GVW                     P   
Sbjct: 178 WLIMKTEGYLQQWAYKITLPLLLAVLVVFGIIGVW--------------------TPFVD 217

Query: 247 EVARQAGAWLVNFNNHPVLWAVPLLGVVLPLMTAVMARAEKGAMAFLFSSLSIACVILTA 306
           E+ R+   W   F+N  ++W +P+L ++  +      R  +  M F+ +        L  
Sbjct: 218 EMVRE--RW---FSNLSIIWVLPVLTLLCAIQIYRSVRDRRDGMPFVATMGLFITTYLGL 272

Query: 307 GIAMFPFIMPSVTVPNVSLTVWDATSSLLTLRVMTVVAIIFVPIVLSYTIWCYYKMFGRI 366
            ++ +P+++P         T+W+A S+  +   + +  +  +PIVL YT W Y+   G++
Sbjct: 273 VVSRWPYVVPP------EYTLWEAASAYESQLFLLLGLLFVIPIVLVYTAWTYWVFRGKV 326