Pairwise Alignments

Query, 379 a.a., cytochrome d ubiquinol oxidase subunit II from Dickeya dadantii 3937

Subject, 383 a.a., cytochrome bd-type quinol oxidase, subunit 2 cydB from Caulobacter crescentus NA1000

 Score =  378 bits (970), Expect = e-109
 Identities = 179/367 (48%), Positives = 247/367 (67%), Gaps = 2/367 (0%)

Query: 3   DYEVLRFVWWLLIGVLLIGFAVTDGFDMGVGVLVRLMGRNDVERRVMINSIAPHWDGNQV 62
           D+  LR +WW L+G+LLIGFA+TDGFDMGVG L+  + + D ERR++IN++   W+GNQV
Sbjct: 6   DFATLRVIWWALVGILLIGFALTDGFDMGVGALLPFVAKTDEERRMVINTVGATWEGNQV 65

Query: 63  WLITAGGALFAAWPMVYAAAFSGFYIAMILVLASLYFRPVGFDYRSKIEDPRWRNMWDWG 122
           W I  GGA+FAAWP VYA +FSGFY+AM +VL ++  RPVGF YRSK +DPRWR  WDW 
Sbjct: 66  WFILGGGAIFAAWPFVYAISFSGFYLAMFVVLTAMILRPVGFKYRSKRQDPRWRAFWDWA 125

Query: 123 IFIGSFVPPVVIGVAFGNLLQGVPFHVDEYLRLYYTGNFFQLLNPFGLLAGVVSLSMIVA 182
           +F+G FVP +  GVA GN+LQG PF +D  LR +Y G+F  L +PF LL G++S+SM+V 
Sbjct: 126 LFVGGFVPVLCFGVALGNVLQGAPFRLDSDLRAFYDGSFLGLFSPFALLCGLLSVSMLVL 185

Query: 183 QGSTYLVMR-TSGDLHFRAKKVAQFSSLALTVTFALAGVWVVYGIDGYAVTSVMNTAAES 241
            G+ ++ ++   G +  RA+++ + + LA  V FA  G WV +G  G+ +  + + A  S
Sbjct: 186 HGAAWITVKGEEGPVAERARRIGELAGLASIVLFAAGGFWVAFGGMGFRIEGLADAAGPS 245

Query: 242 NPLHKEVA-RQAGAWLVNFNNHPVLWAVPLLGVVLPLMTAVMARAEKGAMAFLFSSLSIA 300
           NPL    A R+ GAWL N+  H  +   P+LG     +  +  RA+   MAF  SS S  
Sbjct: 246 NPLRGAAAVREPGAWLDNYGRHGWMILAPVLGFAGAALALLGLRAKSAWMAFTGSSASAV 305

Query: 301 CVILTAGIAMFPFIMPSVTVPNVSLTVWDATSSLLTLRVMTVVAIIFVPIVLSYTIWCYY 360
            +I T G++MFPFI+PS   P  SLTVW+A+SS LTL +M VV I+F+P+VL+YT W Y 
Sbjct: 306 GIIATVGLSMFPFILPSSVDPRSSLTVWNASSSHLTLFIMLVVTIVFLPLVLAYTAWVYK 365

Query: 361 KMFGRIT 367
            ++GR T
Sbjct: 366 VLWGRST 372