Pairwise Alignments

Query, 631 a.a., polysaccharide biosynthesis protein from Dickeya dadantii 3937

Subject, 652 a.a., Polysaccharide biosynthesis protein CapD (NCBI) from Rhodospirillum rubrum S1H

 Score =  326 bits (835), Expect = 2e-93
 Identities = 221/575 (38%), Positives = 321/575 (55%), Gaps = 50/575 (8%)

Query: 21  VIYDAIAIVVSLYLAVAVRLGTLDFPVGYAEIASV----LVTLSITLLVFVRCGMYRAVL 76
           V+  A++ V+SLYL    RLG  D  + Y  +  +     +  +   + F    MY  + 
Sbjct: 20  VVMAALSFVISLYL----RLG--DGLIRYVPLPDLGREAALFAACAAVAFYTQRMYVGIW 73

Query: 77  RYMMLPAMGYVFLSVILSAISLALSSFFF--QSFVPRSVPFIYAGLATLALGSPRVLIRT 134
           RY  +  +  +     L+ +    ++F      +VPRSV  I   +    LG PR L R 
Sbjct: 74  RYASVDDLIALLRGATLTLVLFLPAAFLITRMEYVPRSVLVINWVVLMALLGGPRFLYRL 133

Query: 135 FYYHYYKRQKPN------VFIYGAGATGRDLLYSLIQGDE--FHPVVVLDDDEKKIGQII 186
           F    ++ ++        V + GAG      L S+ +  +  + PV +L + E ++G+ +
Sbjct: 134 FKDRKFQLRRARSRSAIPVLLVGAGDGCEMFLRSVARETDSPYLPVGILSEQETRVGRNL 193

Query: 187 CGIKVHHSREFEKLKPLY--------QPVKLLLAINNIKKGQRLRLLEKLSHWPIEVQSV 238
            G++V  +   ++L  +         +P KL+L    +   Q   LL+      + +  +
Sbjct: 194 RGVEVLGT--LDRLAEIVVRLERWGERPRKLILTSETLDPAQVRGLLDACDALGLSLARL 251

Query: 239 PSVEDIAAGKATATEIRDLDVADLLGREAVGPDKQLMSKNITGKSVMVTGAGGSIGSELC 298
           P + ++  G A + E+R + + DLLGR     D+  +   + G+ V+VTGAGGSIGSEL 
Sbjct: 252 PRLMELRDGGADSLEVRPVAIEDLLGRPQAVLDRAPVVALVGGRRVLVTGAGGSIGSELV 311

Query: 299 RQILTQHPRTLVLFELNEYNLYTIDQELQGIKKRLLLDTKIVAALGSVQKQNRIQKLIRA 358
           RQI    P  L+L + +E+ LYTID E+   ++   L  + V A   V+  +R+ +++  
Sbjct: 312 RQIAALDPARLILADSSEFALYTIDMEIN--ERYPTLSRRPVIA--DVRDGDRVDRVMAE 367

Query: 359 YQVETIYHAAAYKHVPLVEDNVIEGIRNNVFGTLACAEAAIEEGVRNFTLISTDKAVRPT 418
            + E ++HAAA KHVP+VE N +EG+R N  GT   AEA    GV    LISTDKAV PT
Sbjct: 368 EKPELVFHAAALKHVPMVEFNPLEGLRTNALGTRTVAEACRRHGVGTMVLISTDKAVNPT 427

Query: 419 NIMGTSKRMAELILQA--LAERQN--QTTFTMVRFGNVLGSSGSVVPLFKKQIRQGGPVT 474
           N+MG SKRMAE   QA  LAER +   T F  VRFGNVLGS+GSVVPLF++Q+  GGP+T
Sbjct: 428 NVMGASKRMAESWCQALDLAERTSAAATHFVTVRFGNVLGSTGSVVPLFQRQLAAGGPLT 487

Query: 475 VTHPDITRYFMLIPEAAQLVIQAGAMG-----INGQVFVLDMGEPVKILDLARRMINLMG 529
           VTHP+ITR+FM I EA +LV+QA A+G       G +FVLDMGEPVKI DLAR+MI L G
Sbjct: 488 VTHPEITRFFMTIREAVELVLQAAALGSREESYRGSLFVLDMGEPVKIADLARQMIRLAG 547

Query: 530 MKGYIEGYGEEGDIVIKFTGLRPGEKLYEELLIGE 564
           +K        E D+ I +TGLRPGEKL+EE+  G+
Sbjct: 548 LK-------PEVDVQIAYTGLRPGEKLFEEIFHGK 575