Pairwise Alignments

Query, 576 a.a., single-stranded-DNA-specific exonuclease RecJ from Dickeya dadantii 3937

Subject, 580 a.a., single-stranded-DNA-specific exonuclease RecJ from Phaeobacter inhibens DSM 17395

 Score =  282 bits (721), Expect = 3e-80
 Identities = 216/569 (37%), Positives = 303/569 (53%), Gaps = 36/569 (6%)

Query: 16  ELPDSLPALLRRLYAQRGVRQMQE---LERSLRGLL-DYRLLGGITQAVEVLRQALADNR 71
           E   +LPA + ++ A+RGV   +    L   L+ LL D R +  +  A     QA+    
Sbjct: 30  EQQTALPAAVCQVLARRGVPSHEASGFLTPQLKELLPDPRRMKDMEPAAARFLQAVERCE 89

Query: 72  RIVIVGDFDADGATSTALTVLALRSMGGREVQYLVPNRFEDGYGLSPEVVAQAAAKGAEL 131
           RI +  D+D DG +S AL ++ L  +G     Y VP+R ++GYG +   +A A A+  +L
Sbjct: 90  RIAVFADYDVDGGSSAALLLVWLNQVGLSATLY-VPDRIDEGYGPNDAAMA-ALAREHDL 147

Query: 132 IVTVDNGISSHAGVDDAHRRGIAVVVTDHHLPGETLPAAEAMINPNLSDCAFPSKALAGV 191
           IV VD G  SH  +  A  +G  V+V DHHL GETLP   A++NPN  D           
Sbjct: 148 IVCVDCGTLSHGPI--AAAKGADVIVLDHHLGGETLPDCVAVVNPNRQDEDGDLGYFCAA 205

Query: 192 GVAFYLMMALRANLRECGWFAERGLAE-PNLAELLDLVALGTVADVVPLDANNRILISQG 250
           GV F +++ LR  +R+      +GL   P+L  LLDLVAL TVADV PL   NR L+ QG
Sbjct: 206 GVVFLMLVELRRQMRD------KGLGTGPDLMALLDLVALATVADVAPLIEANRALVRQG 259

Query: 251 LSRIRAGKCRPGIRALLEVSNRDAAQLVASDLGFALGPRLNAAGRLDDMSVGVELLLCND 310
           L ++ A + RPG+ AL +VS  D+A      LGF LGPR+NA GR+    +G  LL  +D
Sbjct: 260 L-KVMATRQRPGLVALADVSRMDSAPSTYH-LGFLLGPRVNAGGRIGKADLGARLLATSD 317

Query: 311 IVQARMLASDLDALNQSRREIEAGMQVEALHLCEQLERSRDTLPLGLAMYHPQWHQGVVG 370
             +A  +A+ LD LN  RR+IE  ++  AL   EQ E      PL  A     WH GVVG
Sbjct: 318 PAEAEAIAARLDELNTERRDIENAVRAAAL---EQAEARGLDAPLVWAA-GEGWHPGVVG 373

Query: 371 ILASRIKERFHRPVIAFAPAGDGILKGSGRSIAGLHLRDALERLDTCHPGLMLKFGGHAM 430
           I+ASR+KE   RP I     GD   KGSGRS++G+ L  +++R      GL++K GGH M
Sbjct: 374 IVASRLKEAAGRPAIVIGLDGDE-GKGSGRSVSGIDLGASIQR--AAAEGLLIKGGGHKM 430

Query: 431 AAGLSLVEDRFDEFRQRFADLVGEWLDASQLEGVVWSDGELASPELTLGTAEMLREAGPW 490
           AAGL++  D+ +    R ++L+ +          +  DG L     T+   E + +AGP+
Sbjct: 431 AAGLTVARDQLEPAMARLSELLAKQGAGDLGPSDLKLDGMLMPGAATVPLIEQIEQAGPF 490

Query: 491 GQAFPEPTFDGRFRLLQQRL---VGERHLKV-MVEPLGGGPLLDGIAFNV-DTLLWP--- 542
           G   P P +   F  LQ R    VGE HLK+ + + L  G  +D I F   DT L     
Sbjct: 491 GAGAPAPRYG--FPDLQVRFAKRVGESHLKLSLSDGLSSG--IDAICFGAFDTALGSRLL 546

Query: 543 DSSVREVELAYKLDVNEFRGKRSVQLLIE 571
           D        A +L++N + G++SVQL +E
Sbjct: 547 DHGGARFHFAGRLEINTWGGRQSVQLRLE 575