Pairwise Alignments

Query, 1040 a.a., multidrug transporter from Cupriavidus basilensis FW507-4G11

Subject, 1030 a.a., RND efflux transporter from Pseudomonas putida KT2440

 Score = 1611 bits (4172), Expect = 0.0
 Identities = 803/1019 (78%), Positives = 918/1019 (90%)

Query: 1    MSQGRFNLSALAVRERAITLFLIGLISVAGLVSFFKLGRAEDPAFTVKVMTIITAWPGAT 60
            MSQ RFNLSALAVRER+ITLFLI LI+ AG ++FFKLGRAEDP FTVK MTIITAWPGAT
Sbjct: 1    MSQLRFNLSALAVRERSITLFLIVLIAFAGTLAFFKLGRAEDPPFTVKQMTIITAWPGAT 60

Query: 61   AQEMQDQVAEKIEKRMQELRWYDRTETYTRPGLAFTTLSLLDSTPPSEVQEEFYQARKKV 120
            AQEMQD VAE +EKRMQELRWYDRTETYTRPGLAFT +SL D TPPS VQEEFYQARKK 
Sbjct: 61   AQEMQDLVAEPLEKRMQELRWYDRTETYTRPGLAFTMVSLQDKTPPSAVQEEFYQARKKA 120

Query: 121  SDEVANLPPGVIGPMVNDEYADVTFALFALKAQGEPQRVLVRDAETLRQRLLHVPGVKKV 180
             D+   +P GVIGPM+NDE++DVTFA++ALKA+GEPQR LVRDAETLRQ+LLHVPGVKKV
Sbjct: 121  GDQAKLMPAGVIGPMLNDEFSDVTFAVYALKAKGEPQRQLVRDAETLRQQLLHVPGVKKV 180

Query: 181  NIIGEQPERIYVEFSHDRLATLGVSPQDVFAALNGQNALTAAGSVETKGPQVFIRLDGAF 240
            NIIGEQ ERI+V FSHDRLATLG++PQD+F+AL+ QNAL+ +GSVET+GPQV +R+DGAF
Sbjct: 181  NIIGEQAERIFVSFSHDRLATLGITPQDIFSALDNQNALSPSGSVETQGPQVVVRVDGAF 240

Query: 241  DQLQKIRDTPVVSQGRTLKLSDIATVKRGYEDPATFMVRNGGQPALLLGIVMREGWNGLD 300
            DQL KIR+TPVV+QGR LKLSD+A V+RGYEDPATF+VRN G+PALLLGIVMREGWNGLD
Sbjct: 241  DQLAKIRETPVVAQGRPLKLSDVADVERGYEDPATFLVRNDGEPALLLGIVMREGWNGLD 300

Query: 301  LGKALDKEVGAINADMPLGMSLTKVTDQAVNISAAVDEFMLKFFAALVVVMLVSFVSMGW 360
            LGKAL+ E   IN  MPLGM+L+KVTDQAVNI+++VDEFM+KFF AL+VVMLV F+SMGW
Sbjct: 301  LGKALEAETAKINEGMPLGMTLSKVTDQAVNITSSVDEFMIKFFVALLVVMLVCFLSMGW 360

Query: 361  RAGLVVAAAVPLTLAVVFVVMVATGKNFDRITLGSLILALGLLVDDAIIAIEMMVVKMEE 420
            R G+VVAAAVPLTLA+VFVVM ATGKNFDRITLGSLILALGLLVDDAIIAIEMMVVKMEE
Sbjct: 361  RVGVVVAAAVPLTLAIVFVVMAATGKNFDRITLGSLILALGLLVDDAIIAIEMMVVKMEE 420

Query: 421  GYSRVAASAYAWSHTAAPMLSGTLVTAVGFMPNGFARSSAGEYTSNMFWIVGIALIASWV 480
            GY R+ ASAYAWSHTAAPMLSGTLVTA+GFMPNGFA+S+AGEYTSNMFWIVGIALIASWV
Sbjct: 421  GYDRIKASAYAWSHTAAPMLSGTLVTAIGFMPNGFAQSTAGEYTSNMFWIVGIALIASWV 480

Query: 481  VAVVFTPYLGVKMLPDFKKVEGGHDAIYDTPRYNRFRALLGYVIARKWLVAGSVVGLFVL 540
            VAV FTPYLGVK+LP  K +EGGH AIY+T  YNRFRALLG+VIA KWLVAG+VV  FV 
Sbjct: 481  VAVAFTPYLGVKLLPRIKTIEGGHAAIYNTRHYNRFRALLGWVIAHKWLVAGTVVSTFVA 540

Query: 541  AILGMAVVKKQFFPISDRPEVLVEVQMPYGTSINQTSAATAKLEAWLAKQKEARIVTAYV 600
            A+LGM +VKKQFFP SDRPEVLVE+QMPYGTSI QT+A   K+E+WL +Q+EA+IVT Y+
Sbjct: 541  AVLGMGLVKKQFFPTSDRPEVLVELQMPYGTSIEQTNATAIKVESWLRQQEEAKIVTTYI 600

Query: 601  GQGAPRFYFAMGPELPDPSFAKIVVRTDSQEERDALKQRLRQAVADGLAPEARVRVTQLV 660
            GQG PRF+ AM PELPDPSFAKIVV T++Q  R+ALK RLR+A ++GLAP A+VRVTQLV
Sbjct: 601  GQGPPRFFLAMAPELPDPSFAKIVVLTENQGAREALKHRLREAASEGLAPGAQVRVTQLV 660

Query: 661  FGPYSPFPVAYRVTGPDAQTLRRIAADVRQVMDASPMMRTVNTDWGMRVPTLHFTLEQDR 720
            FGPYSP+PVAYRV GPDA  LR+IAA V+ V+ ASPMM+TVNTDWG  VPTLHF+L QDR
Sbjct: 661  FGPYSPYPVAYRVMGPDASQLRQIAARVQSVLQASPMMKTVNTDWGPLVPTLHFSLNQDR 720

Query: 721  LQAVGLTSSAVAQQLQFLLNGIPVTAVREDIRTVQVTARSAGDIRLDPARIGDFTLAGAN 780
            LQ+VGLTS++V+QQLQFLL G+P+T+VREDIR+VQV  R+AG IRLDPA+I +FTL G+N
Sbjct: 721  LQSVGLTSASVSQQLQFLLTGVPITSVREDIRSVQVVGRAAGQIRLDPAQIENFTLVGSN 780

Query: 781  GQRIPLSQVGKIDVRMEEPIIRRRDRMPTITVRGDIADGLQPPDVSTAISKQLAPIIEKL 840
            GQR+P+SQ+G + +RME+PI+RRRDR PT+TVRGDIA+GLQPPDVSTAI K L PI+ +L
Sbjct: 781  GQRVPVSQIGDVSIRMEDPILRRRDRTPTMTVRGDIAEGLQPPDVSTAIWKDLQPIVTQL 840

Query: 841  PSGYRIEQAGSIEESGKATKAMLPLFPIMLAVTLLILIFQVRSIAAMVMVFLTSPLGLIG 900
            P+GY+IE AGSIEES KA++A++PL PIM+A+TLLI+I QVRSI+AMVMVFLTSPLGLIG
Sbjct: 841  PAGYKIEMAGSIEESAKASQAIVPLLPIMIALTLLIIILQVRSISAMVMVFLTSPLGLIG 900

Query: 901  VVPMLILFGQPFGINALVGLIALSGILMRNTLILIGQIQHNKEEGLDPFRAVVEATVQRA 960
            VVP+L+LFGQPFGINALVGLIALSGILMRNTLILIGQI HN+ EGL PF AVVEATVQRA
Sbjct: 901  VVPVLLLFGQPFGINALVGLIALSGILMRNTLILIGQIDHNQLEGLAPFDAVVEATVQRA 960

Query: 961  RPVILTALAAILAFIPLTHSVFWGALAYTLIGGTFAGTILTLVFLPAMYSIWFKIRPGN 1019
            RPV+LTALAAILAFIPLTHSVFWG LAYTLIGGTF GTI+TLVFLPAMYSIWFKIRP +
Sbjct: 961  RPVLLTALAAILAFIPLTHSVFWGTLAYTLIGGTFVGTIMTLVFLPAMYSIWFKIRPNS 1019