Pairwise Alignments

Query, 1040 a.a., multidrug transporter from Cupriavidus basilensis FW507-4G11

Subject, 1021 a.a., RND efflux transporter from Pseudomonas putida KT2440

 Score =  807 bits (2084), Expect = 0.0
 Identities = 442/1020 (43%), Positives = 644/1020 (63%), Gaps = 8/1020 (0%)

Query: 6    FNLSALAVRERAITLFLIGLISVAGLVSFFKLGRAEDPAFTVKVMTIITAWPGATAQEMQ 65
            FNLSA A+R R I LFL+ L++  G +S+ KLG++EDP FT K M I T WPGA+A+E+ 
Sbjct: 3    FNLSAWALRNRQIVLFLMILLAAIGAMSYTKLGQSEDPPFTFKAMVIRTLWPGASAEEVA 62

Query: 66   DQVAEKIEKRMQELRWYDRTETYTRPGLAFTTLSLLDSTPPSEVQEEFYQARKKVSDEVA 125
             QV E+IEK++ E   Y+R  +++RPG +  T    DS    ++ E +YQ RKKV+D   
Sbjct: 63   RQVTERIEKKLMETGEYERIVSFSRPGESQVTFMARDSLHSKDIPELWYQIRKKVADIRH 122

Query: 126  NLPPGVIGPMVNDEYADVTFALFALKAQGEPQRVLVRDAETLRQRLLHVPGVKKVNIIGE 185
             LPP + GP  NDE+      ++AL  +G    VL   A+ ++ +L  V  V KV++IG 
Sbjct: 123  TLPPEIQGPFFNDEFGTTFGNIYALTGEGFDYAVLKDYADRIQIQLQRVKDVGKVDLIGL 182

Query: 186  QPERIYVEFSHDRLATLGVSPQDVFAALNGQNALTAAGSVETKGPQVFIRLDGAFDQLQK 245
            Q E++++E S+ +LATLGV  + V  AL  QNA++ AG  ET   ++ +R+ G FD +++
Sbjct: 183  QDEKVWIELSNLKLATLGVPLEAVQKALQEQNAVSTAGFFETPSERLQLRVSGRFDSVEQ 242

Query: 246  IRDTPVVSQGRTLKLSDIATVKRGYEDPATFMVRNGGQPALLLGIVMREGWNGLDLGKAL 305
            IR  P+    RT ++ D+A V RG+ DP    +R  G+ A+ L + M++G + L LGKAL
Sbjct: 243  IRQFPIRVGDRTFRIGDVAEVHRGFNDPPAPRMRFMGEDAIGLAVSMKDGGDILVLGKAL 302

Query: 306  DKEVGAINADMPLGMSLTKVTDQAVNISAAVDEFMLKFFAALVVVMLVSFVSMGWRAGLV 365
            + E   +  ++P GM+L KV+DQ   + A V EF+     ALV+V+LVSF S+G R GLV
Sbjct: 303  EGEFERLAHNLPAGMALRKVSDQPAAVKAGVGEFVQVLVEALVIVLLVSFFSLGLRTGLV 362

Query: 366  VAAAVPLTLAVVFVVMVATGKNFDRITLGSLILALGLLVDDAIIAIEMMVVKMEEGYSRV 425
            VA A+PL LA+ F  M   G    +I+LG+L+LALGLLVDDAIIA+EMM +KME+GY R+
Sbjct: 363  VALAIPLVLAMTFAAMHYFGIGLHKISLGALVLALGLLVDDAIIAVEMMAIKMEQGYDRL 422

Query: 426  AASAYAWSHTAAPMLSGTLVTAVGFMPNGFARSSAGEYTSNMFWIVGIALIASWVVAVVF 485
             A++YAW+ TA PML+GTL+TA GF+P   A SS GEYT ++F +V IAL+ SWV AVVF
Sbjct: 423  KAASYAWTSTAFPMLTGTLITAAGFLPIATAASSTGEYTRSIFQVVTIALLTSWVAAVVF 482

Query: 486  TPYLGVKMLPDFKKV-------EGGHDAIYDTPRYNRFRALLGYVIARKWLVAGSVVGLF 538
             PYLG ++LPD  K+       +G     Y TP Y R R L+ + + R+  V    +  F
Sbjct: 483  VPYLGERLLPDLAKLHAARHGKDGHAPDPYATPFYQRVRRLVEWCVRRRKTVILLTIAAF 542

Query: 539  VLAILGMAVVKKQFFPISDRPEVLVEVQMPYGTSINQTSAATAKLEAWLAKQKEARIVTA 598
            V +IL    V +QFFP S RPE++V++++  G S+  T+    +LEA L +Q       A
Sbjct: 543  VGSILLFRFVPQQFFPASGRPELMVDLKLAEGASLANTAERVKQLEALLKQQDGIDNYVA 602

Query: 599  YVGQGAPRFYFAMGPELPDPSFAKIVVRTDSQEERDALKQRLRQAVADGLAPEARVRVTQ 658
            YVG G+PRFY  +  +LP  SFA+ VV   S E+R+ L+  L   V D   P+ R RVT+
Sbjct: 603  YVGTGSPRFYLPLDQQLPAASFAQFVVLAKSMEDRERLRSWLISTV-DQQFPDLRARVTR 661

Query: 659  LVFGPYSPFPVAYRVTGPDAQTLRRIAADVRQVMDASPMMRTVNTDWGMRVPTLHFTLEQ 718
            L  GP   +PV +RVTG   +  R +A +V   +  +P +  V+ DW      +   ++Q
Sbjct: 662  LENGPPVGYPVQFRVTGEHIEKARALAREVADKVRENPHVVNVHLDWEEPSKAVFLEIDQ 721

Query: 719  DRLQAVGLTSSAVAQQLQFLLNGIPVTAVREDIRTVQVTARSAGDIRLDPARIGDFTLAG 778
            DR +A+G+++S +A  LQ  L G  V+  RED   +++  R     R + A +G   L  
Sbjct: 722  DRARALGVSTSHLASFLQSSLIGTTVSQYREDNELIEILLRGTLQERSELANLGSLALPT 781

Query: 779  ANGQRIPLSQVGKIDVRMEEPIIRRRDRMPTITVRGDIADGLQPPDVSTAISKQLAPIIE 838
             NGQ + LSQV  ++   EE II  R+R+PT+TVR DI D  QP  +   I   L  I  
Sbjct: 782  DNGQSVALSQVATLEYGFEEGIIWHRNRLPTVTVRADIYDQEQPATLVKQILPTLQEIRA 841

Query: 839  KLPSGYRIEQAGSIEESGKATKAMLPLFPIMLAVTLLILIFQVRSIAAMVMVFLTSPLGL 898
            KLP GY +E  G++E+S +  K++    P+ + V L +L+ Q+RS +  VMVFLT+PLGL
Sbjct: 842  KLPDGYLLEVGGTVEDSERGQKSVNAGMPLFIVVVLSLLMIQLRSFSRTVMVFLTAPLGL 901

Query: 899  IGVVPMLILFGQPFGINALVGLIALSGILMRNTLILIGQIQHNKEEGLDPFRAVVEATVQ 958
            IGV   L++F QPFG  A++G IAL+G++MRN++IL+ QI+ +   G++ ++A++EATV+
Sbjct: 902  IGVTLFLLVFRQPFGFVAMLGTIALAGMIMRNSVILVDQIEQDIAAGMERWQAIIEATVR 961

Query: 959  RARPVILTALAAILAFIPLTHSVFWGALAYTLIGGTFAGTILTLVFLPAMYSIWFKIRPG 1018
            R RP++LTALAA+LA IPL+ SVF+G +A  ++GG    T+LTL+FLPA+Y+ WF+++ G
Sbjct: 962  RFRPIVLTALAAVLAMIPLSRSVFYGPMAVAIMGGLIVATVLTLLFLPALYAAWFRVKKG 1021