Pairwise Alignments

Query, 391 a.a., RND transporter from Cupriavidus basilensis FW507-4G11

Subject, 377 a.a., Probable Co/Zn/Cd efflux system membrane fusion protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 89.4 bits (220), Expect = 2e-22
 Identities = 107/394 (27%), Positives = 164/394 (41%), Gaps = 66/394 (16%)

Query: 4   NRLVRRIAIVVAILVGLVVAGWYATRAKPVAVLTAR---------------VEQGRVEAT 48
           N+ +  +  VV I +    A W   R K  A +                  VE  RV+  
Sbjct: 3   NKALYVVVAVVGIGLASGAAWWLQNRDKAAAPVAGTGTGAGPGAAGGGAPGVEVTRVKTI 62

Query: 49  VANTRAGAVSACRRAK---LAPPAAGRIEVLNIHKGDRVKAGQVLLVLWNEDLVAREQLS 105
                A AV   R  +   L P  +GR+  +    G RVKAGQ+L+ L  +D + R +LS
Sbjct: 63  RLQDDAQAVGTLRSRQSVTLKPETSGRVARIVFADGARVKAGQLLVQL--DDTLQRAELS 120

Query: 106 QHQLLTATAHAREVCELAKVAASDARRSRELVAKGFVSPQAVERTDADADSRRAACESAR 165
           Q Q   +            +A ++ +R++ELVA+ FV+ + VE + A+        + A 
Sbjct: 121 QAQAQLS------------IARANLKRNQELVAQNFVAQRVVEESQAN-------LQVAE 161

Query: 166 AQVKEAGARIAASRADTARTVLKAPFDGVVAEVNGEIGEYLTPSPPGIPTLPAVDLIDDS 225
           AQV  A AR+   R       + APF G V   +  +G Y+            V+L D S
Sbjct: 162 AQVALADARLQRMR-------ITAPFAGTVGLRSINLGAYVKDGD------SLVNLEDTS 208

Query: 226 CLYVSAPIDEIDAARLQVGMPARVTLDAYRGRHFEGRLRRVAPYVLALEKQARTVEVEVQ 285
            L V   + E   ++L  G   +V LDA   R FE ++  V P    L+   R++ V   
Sbjct: 209 MLTVDFRLPERYQSQLAPGQVVQVQLDALPNRPFEAKVLAVDP---LLDANGRSISVRAV 265

Query: 286 FDSPDLVRHLLVGYSADVEIVTDARDQTLRIPTTAL---ASGNRVLVLNPAGRLEAR--- 339
              P     L  G  A V IV    ++ L +P  AL   A      VL+  G  +A+   
Sbjct: 266 M-PPAADNVLRPGMFARVLIVFSVNERALVVPEEALVPQAGKQYAYVLDEQGEGDAKKRL 324

Query: 340 ----TIGTGIANAEFTEVTAGLRRGERVVTSPER 369
                +  G       EV +GL++G+ VV + ++
Sbjct: 325 SRRVEVALGARRGSEVEVVSGLQQGDAVVIAGQQ 358