Pairwise Alignments

Query, 391 a.a., RND transporter from Cupriavidus basilensis FW507-4G11

Subject, 641 a.a., Macrolide-specific efflux protein MacA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 90.9 bits (224), Expect = 9e-23
 Identities = 80/335 (23%), Positives = 145/335 (43%), Gaps = 19/335 (5%)

Query: 3   RNRLVRRIAIVVAILVGLVVAG------WYATRAKPVAVLTARVEQGRVEATVANTRAGA 56
           R R   ++A++  + + ++  G      W        A +TA V++G +E  V+ T  G+
Sbjct: 19  RRRKTWKLALIALVSLAVLGGGGFAYYRWGPGAKTESAYITATVQRGDIEDQVSAT--GS 76

Query: 57  VSACRRAKLAPPAAGRIEVLNIHKGDRVKAGQVLLVLWNEDLVAREQLSQHQLLTATAHA 116
           +       +    +G++  +++  G  VK G +L  +  E  +AR   S+ QL +  A  
Sbjct: 77  LQPRDYVDVGAQVSGQLRKIHVEVGTEVKEGDLLAEIDAETSMARVDASRAQLRSQQAQM 136

Query: 117 REVCELAKVAASDARRSRELVAKGFVSPQAVERTDADADSRRAACESARAQVKEAGARIA 176
            E       A  D +R + L+A+   + + ++  +    + RA   S +A +++  A + 
Sbjct: 137 GERELTLAKAERDLQRQKNLMAEEATTAETLQNAETAVKTARAQILSLKASMEQLQASMR 196

Query: 177 ASRADTARTVLKAPFDGVVAEVNGEIGEYLTPSPPGIPTLPAVDLIDDSCLYVSAPIDEI 236
              A+   T + AP  G V  +    G+ L  +    PTL  + + D S + V   + E 
Sbjct: 197 VEEANLKYTKIYAPMAGTVVSITARQGQTLNTNQSA-PTL--MRIADLSVMTVQTQVSEA 253

Query: 237 DAARLQVGMPARVTLDAYRGRHFEGRLRRVAPYVLALEKQARTVEVEVQFDSPDLVRHLL 296
           D ++L+ GMP   T    +GR + G L+++ P           V     F+ P+  R L+
Sbjct: 254 DVSKLRGGMPVYFTTLGGQGRRWYGELKKIEPTPTVTN---NVVLYNALFEVPNNNRSLM 310

Query: 297 VGYSADVEIVTDARDQTLRIPTTAL-----ASGNR 326
              +A V  V       L +P +AL     A GNR
Sbjct: 311 TQMTAQVFFVVAEAKDVLVVPMSALTIQRGAQGNR 345



 Score = 35.4 bits (80), Expect = 5e-06
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 9/62 (14%)

Query: 326 RVLVLNPAGRLEARTIGTGIANAEFTEVTAGLRRGERVVTSPERIGLQAGIAAVEAEPAT 385
           +V V+   G +E R +  GI+N    EV +GL+ G+RV+         AG+   E  PA 
Sbjct: 562 KVKVMAEDGTIEEREVTIGISNRVHAEVLSGLKEGDRVI---------AGVREPERRPAN 612

Query: 386 AE 387
            +
Sbjct: 613 TQ 614