Pairwise Alignments

Query, 450 a.a., 16S rRNA methyltransferase from Cupriavidus basilensis FW507-4G11

Subject, 456 a.a., Ribosomal RNA small subunit methyltransferase B from Xanthobacter sp. DMC5

 Score =  205 bits (521), Expect = 3e-57
 Identities = 168/467 (35%), Positives = 229/467 (49%), Gaps = 67/467 (14%)

Query: 8   LAFQMLAAAAAVRGVNEGSALPLAIENAAAQYRLDRVRDAATRGALQDLAYR----TMRQ 63
           L+ + +A  A    + +G+AL  A++  A + R DR            LAYR     +R+
Sbjct: 27  LSARAVAVDALEAVLRQGAALEEALDGPALEPR-DRA-----------LAYRIVATALRR 74

Query: 64  FGTARALVTKLVTR--PPGA--LVDSLLAVALALLVEDEQGEGGYTEFTVVDQAVSAAAS 119
            GT R ++ KL+ R  P  A  L   LLA A  +L  D            V  +V  A +
Sbjct: 75  LGTLRTVLGKLMERGFPKSAPRLESVLLAGATQILFMDVPSHAA------VGLSVDLARA 128

Query: 120 EPKTAHARGLVNAVLRRFLRERKALLAEVRQDDEARWNLPAWWLDALRKAYPDQWT-ALA 178
           +  T    GLVNAVLRR  RE +AL+A V  D     + P W      KAY  +   A+A
Sbjct: 129 DRSTVGFAGLVNAVLRRVAREGEALMAGVDPDFA---DTPDWLRQRWIKAYGAETARAMA 185

Query: 179 ESANVRPPMTLRVNTARVSVPDYLKRVLNAGMAGVAIGPQAVRLVRAFPVSQIPGFAEGD 238
               V PP+ + V T   S    L        +G  +    VR+++A PV  +PGFAEG+
Sbjct: 186 TMHRVEPPLDITVKTDPESWAGKL--------SGEVLPTGTVRILQAGPVRALPGFAEGE 237

Query: 239 VSVQDAGAQLAAALLDLADGQRVLDACAAPGGKTGHILELANVEVTALESDAQRATRIDE 298
             VQDA A L A LL   DG +V D CAAPGGKT  ++  A  +VTA++    R TR+ +
Sbjct: 238 WWVQDAAAALPARLLGKVDGLKVADLCAAPGGKTAQLVA-AGAQVTAVDRSGARLTRLRD 296

Query: 299 NLARLGQQATVVVGNASRPQDWWDNRQYDRILADVPCSASGIVRRHPDIRWLRREVDIPR 358
           NLARLG  ATVV G+A+     +    +D +L D PCSA+G +RRHPDI   +R  DIP 
Sbjct: 297 NLARLGLAATVVEGDAAT----FAGGPFDAVLLDAPCSATGTLRRHPDIAVSKRPSDIPT 352

Query: 359 LVTEQRRIVSQLWNLLKPGGILVYVTCSIFPTENEEQARWFGAQLPDA------------ 406
           L T Q R++    +L+KPGG++VY TCS+ P E E Q     A   D             
Sbjct: 353 LATLQARLLDHAIDLVKPGGLVVYSTCSLEPEEGEAQVERLLAARKDVEREPLRAGEVDG 412

Query: 407 ----IRLQAPGQMLPGSMDQLAGGGNGSQEGLPTDHDGFFYARFQKR 449
               I  Q   + LP    +    G   + GL    DGFF AR +++
Sbjct: 413 LDLFITPQGDVRTLPSHWMR----GEAERSGL----DGFFAARLRRK 451