Pairwise Alignments

Query, 701 a.a., ATP-dependent DNA helicase Rep from Cupriavidus basilensis FW507-4G11

Subject, 669 a.a., helicase a single-stranded DNA dependent ATPase from Pseudomonas putida KT2440

 Score =  535 bits (1378), Expect = e-156
 Identities = 310/700 (44%), Positives = 428/700 (61%), Gaps = 50/700 (7%)

Query: 5   LNPAQSEAVRYLDGPCLVLAGAGSGKTRVITQKIAHLIEDKGFQPKHIAAVTFTNKAAKE 64
           LNP Q EA  Y+ GP LVLAGAGSGKT VIT+KIAHLI++ G + ++I A+TFTNKAA+E
Sbjct: 4   LNPRQQEARDYVGGPLLVLAGAGSGKTSVITRKIAHLIQNCGIRAQYIVAMTFTNKAARE 63

Query: 65  MQERIAKLMEGKTTREGKRIPIKQITVSTFHSLGVQILRAEAEHVGLKPRFSIMDSDDCF 124
           M+ER+A L+     R G+    + +TV TFH+LG+ I+R E E +G KP FSI D  D  
Sbjct: 64  MKERVATLL-----RPGEG---RGLTVCTFHNLGLNIIRKEHERLGYKPGFSIFDESDIK 115

Query: 125 GMVQE--QLASTDKKLIRSVQSTISLWKNGMVDPETAIARADNPDDHQAALIYRNYVATL 182
            ++ +  Q   +    I  +++ I  WKN +V P  A+ +A NP +  AA++Y +Y  TL
Sbjct: 116 ALLSDIMQKEYSGDDGIDEIKNMIGAWKNDLVLPPEALEKARNPREQTAAIVYTHYQRTL 175

Query: 183 HAYQAVDFDDLIRLPAELFARNEEVRLRWQNRLRYFLVDEYQDTNACQYQLLKQLAGGSH 242
            A+ AVDFDDLI  P +LF  + EV  RWQNR+RY LVDEYQDTNA QY L+K L G  +
Sbjct: 176 KAFNAVDFDDLILQPVKLFQEHPEVLERWQNRVRYLLVDEYQDTNASQYLLVKMLIGMRN 235

Query: 243 LRAPAFTAVGDDDQAIYGWRGATLDNLKLLQTDFPDLKVVKLEQNYRSTVRILEAANAVI 302
                FT VGDDDQ+IY WRGA  +NL LL+ D+P LK+V LEQNYRST RIL  AN +I
Sbjct: 236 ----QFTVVGDDDQSIYAWRGARPENLMLLKEDYPSLKIVMLEQNYRSTSRILRCANVLI 291

Query: 303 SNNPKLFDKKLWSEHGMGDPIAVNPMNDEEHEAESVVFRLSAHKFERRAQFRDYAILYRG 362
           +NNP  F+K+LWSE G+GD I V    +EE EAE V   +          + D+AILYRG
Sbjct: 292 ANNPHAFEKQLWSEMGVGDEIRVIRCKNEEAEAERVAMEILTLHLRTNRPYSDFAILYRG 351

Query: 363 NHQARLFEQILRRERIPYVLSGGQSFFDKAEIKDICAYLRLIANPDDDPAFIRAITTPKR 422
           N+QA+L E  L+  ++PY LSGG SFF + E+KD+ AYLRL+ NPDDD A++R I  P+R
Sbjct: 352 NYQAKLIELKLQHHQVPYRLSGGNSFFGRQEVKDLMAYLRLLVNPDDDNAYLRVINVPRR 411

Query: 423 GVGNTTLEVLGTFAGQAKVSLFEAAMMGGIEGKLQPRQLEPLRVFCEAMVRLAGRAASDP 482
            +G+TTLE LG +A +  +S++ A+   G+   L  R  E L+ F   +  +  + A + 
Sbjct: 412 EIGSTTLEKLGNYATERGISMYAASEELGLGEHLDARYTERLQRFKHWLDGVRHKVALED 471

Query: 483 ATQVLDDMMEGIHYEAYL-YDTFDERQAQSRWTNTLEFLDWLKRKGTKPEATGEGEEATG 541
               L +M+  I YE ++   T  ++ A+ R +N    ++ LK        T E +E   
Sbjct: 472 PIAALHEMIRDIDYENWIRQQTASDKAAEFRISNVWFLVEALKN-------TLEKDEEGD 524

Query: 542 FDTADGFGDEGKNLLELTQTVALMSMLEGR---EEDPDAVRLSTLHASKGLEYPHVFLVG 598
               D  G            + L  MLE +   EE+ + V++ TLHASKGLE+P+VF++G
Sbjct: 525 MTIEDAIG-----------KLVLRDMLERQQEEEENAEGVQMMTLHASKGLEFPYVFIMG 573

Query: 599 VEEGILPHCREDEDMSDEKIEEERRLMYVGITRAQRSLHLSWCKKRKRARDTYSCEPSRF 658
           +EE ILPH      +  + IEEERRL YVGITRA+++L  ++  KRK+  +   C PSRF
Sbjct: 574 MEEEILPH---RSSIEADTIEEERRLAYVGITRARQTLAFTFAAKRKQYGEIIDCTPSRF 630

Query: 659 IGEMK--------LEEAPAIKDETPAMSPKDRLAGLKALL 690
           + E+         L++AP    E  A    + LA ++A+L
Sbjct: 631 LDELPPDDLAWEGLDDAPV---EVKAARGNNALADIRAML 667