Pairwise Alignments

Query, 701 a.a., ATP-dependent DNA helicase Rep from Cupriavidus basilensis FW507-4G11

Subject, 726 a.a., Superfamily I DNA and RNA helicases from Kangiella aquimarina DSM 16071

 Score =  368 bits (945), Expect = e-106
 Identities = 247/693 (35%), Positives = 372/693 (53%), Gaps = 63/693 (9%)

Query: 5   LNPAQSEAVRYLDGPCLVLAGAGSGKTRVITQKIAHLIEDKGFQPKHIAAVTFTNKAAKE 64
           LN AQ EAV   +   LVLAGAGSGKTRV+  +IA L++ +      I AVTFTNKAAKE
Sbjct: 10  LNDAQKEAVTAPNKALLVLAGAGSGKTRVLVHRIAWLVQVERVSAHSILAVTFTNKAAKE 69

Query: 65  MQERIAKLMEGKTTREGKRIPIKQITVSTFHSLGVQILRAEAEHVGLKPRFSIMDSDDCF 124
           M  R+  ++          +P + + + TFHS+  ++LRA     GL   F I+D+ D  
Sbjct: 70  MLGRVEDMLA---------MPARGMWIGTFHSIAHRLLRAHYRDAGLPEGFQILDAQDQL 120

Query: 125 GMVQEQLASTDKKLIRSVQSTISLWKNGMVDPETAIARADN--PDD--HQAALIYRNYVA 180
            ++        K++++ +    + W            + D   P D  H         V 
Sbjct: 121 RVI--------KRVMKELNLDDNEWPPKQAQWFINAKKDDGLRPGDIHHHGDFFVSTMVK 172

Query: 181 TLHAYQA-------VDFDDLIRLPAELFARNEEVRLRWQNRLRYFLVDEYQDTNACQYQL 233
             +AY+        VDF++L+    EL+A N  +   +Q+R ++ LVDE+QDTNA QY  
Sbjct: 173 VYYAYEEACKRGGLVDFNELLLRAYELWANNPHLLKHYQDRFQHILVDEFQDTNAIQYAW 232

Query: 234 LKQLAGGSHLRAPAFTAVGDDDQAIYGWRGATLDNLKLLQTDFPDLKVVKLEQNYRSTVR 293
           ++ L   ++      T VGDDDQ+IYGWRGA ++N++  + DFPD KV +LEQNYRST  
Sbjct: 233 IRLLCNDNN----RITIVGDDDQSIYGWRGARIENIQQFEKDFPDCKVSRLEQNYRSTST 288

Query: 294 ILEAANAVISNNPKLFDKKLWSEHGMGDPIAVNPMNDEEHEAESVVFRLSAHKFERRAQF 353
           IL+AANAVI+NN     K LW+E   G+PI +    +E+ EA  +  R+     ++   +
Sbjct: 289 ILKAANAVIANNQDRMGKSLWTEGNQGEPIILYSAFNEQEEARFIAARIE-DWVQQGNSY 347

Query: 354 RDYAILYRGNHQARLFEQILRRERIPYVLSGGQSFFDKAEIKDICAYLRLIANPDDDPAF 413
            D AILYR N Q+R+ E  + ++ IPY + GG  FF++AEIKD  AY+RL+AN DDD +F
Sbjct: 348 DDIAILYRSNAQSRILEDAMLQKGIPYRIYGGLRFFERAEIKDTLAYMRLMANRDDDTSF 407

Query: 414 IRAITTPKRGVGNTTLEVLGTFAGQAKVSLFEAAMMGGIEGKLQPRQLEPLRVFCEAMVR 473
            R +  P RG+G  +++++   A Q + SL++AA    +E  L PR    L  F   +  
Sbjct: 408 ERVVNQPARGLGEKSVDMIRMQARQDETSLWQAASKMVVEQLLPPRAKNALGGFLHLINE 467

Query: 474 LAGRAASDPATQVLDDMMEGIHYEAYLYDTFDE---RQAQSRWTNTLEFLDWLKRKGTKP 530
           L    A     +  D ++E     + L D + +    + Q+R  N  E ++         
Sbjct: 468 LETSTAELDLWEQTDIVIE----HSGLLDMYSKEKGEKGQARKENLQELVN--------- 514

Query: 531 EATGEGEEATGFDTADGFGDEGKNLLELTQTVALMSMLEGR---EEDPDAVRLSTLHASK 587
            AT E      FD  +   DE  ++  L   +A  ++  G    +E  ++V++ TLH++K
Sbjct: 515 -ATRE------FDPDEAIPDETPDMTPLQAFIAHATLEAGETQADEYQESVQMMTLHSAK 567

Query: 588 GLEYPHVFLVGVEEGILPHCREDEDMSDEKIEEERRLMYVGITRAQRSLHLSWCKKRK-R 646
           GLE+P VF+ GVEE + PH    ++     +EEERRL YVGITRA + L+L++ +KR+  
Sbjct: 568 GLEFPLVFIAGVEEKLFPHQMSLDEPGG--LEEERRLAYVGITRAMKQLYLTFAEKRRIF 625

Query: 647 ARDTYSCEPSRFIGEMKLEEAPAIKDETPAMSP 679
            R+TY  + SRFI E+  E    ++  T    P
Sbjct: 626 GRETYP-QQSRFIREIPDELLTEVRLNTRVQRP 657