Pairwise Alignments

Query, 701 a.a., ATP-dependent DNA helicase Rep from Cupriavidus basilensis FW507-4G11

Subject, 824 a.a., DNA helicase II from Agrobacterium fabrum C58

 Score =  369 bits (947), Expect = e-106
 Identities = 242/666 (36%), Positives = 349/666 (52%), Gaps = 44/666 (6%)

Query: 4   GLNPAQSEAVRYLDGPCLVLAGAGSGKTRVITQKIAHLIEDKGFQPKHIAAVTFTNKAAK 63
           GLNP Q EAV  LDGP LVLAGAG+GKTRV+T +IAH++      P  I AVTFTNKAA+
Sbjct: 55  GLNPEQREAVETLDGPVLVLAGAGTGKTRVLTTRIAHILATGRAYPSQILAVTFTNKAAR 114

Query: 64  EMQERIAKLMEGKTTREGKRIPIKQITVSTFHSLGVQILRAEAEHVGLKPRFSIMDSDDC 123
           EM+ERI  L+ G    EG         + TFHS+GV++LR  AE +GLK  F+I+D+DD 
Sbjct: 115 EMKERIGVLVGGAV--EGMP------WLGTFHSIGVKLLRRHAELIGLKSDFTILDTDDV 166

Query: 124 FGMVQEQLAST---DKKL-IRSVQSTISLWKN-GMVDPETAIARADNPDDHQAALIYRNY 178
             ++++ + +    DK+   +     I  WKN G+  P+     +    + +   +Y  Y
Sbjct: 167 VRLIKQLIQAEGLDDKRWPAKQFAGMIDGWKNKGLTPPDIPEGDSRAFANGKGRELYAAY 226

Query: 179 VATLHAYQAVDFDDLIRLPAELFARNEEVRLRWQNRLRYFLVDEYQDTNACQYQLLKQLA 238
            A L    A DF DL+  P  +F R+ ++   +  + RY LVDEYQDTN  QY  L+ LA
Sbjct: 227 QARLKTLNACDFGDLLLHPISIFRRHTDILKEYHQKFRYILVDEYQDTNTAQYMWLRLLA 286

Query: 239 GGSHLRAPAFTAVGDDDQAIYGWRGATLDNLKLLQTDFPDLKVVKLEQNYRSTVRILEAA 298
             +         VGDDDQ+IYGWRGA +DN+     DFP  KV+KLE+NYRST  IL AA
Sbjct: 287 QRAKDEPQNVCCVGDDDQSIYGWRGAEVDNILRFDKDFPGAKVIKLERNYRSTEHILGAA 346

Query: 299 NAVISNNPKLFDKKLWSEHGMGD--PIAVNPMNDEEHEAESVVFRLSAHKFERRAQFRDY 356
             +I++N     K L++E    D   + V+   D E EA +V   +   +  +  +  D 
Sbjct: 347 GHLIAHNEGRLGKTLFTERSSPDDEKVVVHAAWDSEEEARAVGEEIEQLQ-RKNYKLNDM 405

Query: 357 AILYRGNHQARLFEQILRRERIPYVLSGGQSFFDKAEIKDICAYLRLIANPDDDPAFIRA 416
           AIL R + Q R FE       + Y + GG  F+++ EI+D  AY RL+  P DD AF R 
Sbjct: 406 AILVRASFQMREFEDRFVTLGLNYRVIGGPRFYERLEIRDAMAYFRLVCQPADDLAFERI 465

Query: 417 ITTPKRGVGNTTLEVLGTFAGQAKVSLFEAAMMGGIEGKLQPRQLEPLRVFCEAMVRLAG 476
           + TPKRG+G+TT+  L  +A    + +  AA       +L+P+  + L    +   R  G
Sbjct: 466 VNTPKRGLGDTTIRNLHDYARARDIPMLAAAADIIETDELKPKARKALFDVVQDFRRWQG 525

Query: 477 RAASDPATQVLDDMMEGIHYEAYLYDTFDERQAQSRWTNTLEFLDWLKRKGTKPEATGEG 536
              +   T + + +++   Y A ++      +A  R  N  E +                
Sbjct: 526 LLENTEHTTLAEQILDESGYTA-MWQADKTAEAPGRLENLKELI---------------- 568

Query: 537 EEATGFDTADGFGDEGKNLLELTQTVALMSMLEGREEDPDAVRLSTLHASKGLEYPHVFL 596
                F++  GF +    +++  Q   L           DAV + TLH++KGLE+  VFL
Sbjct: 569 RSMESFESMRGFLEHVALVMDAEQNAEL-----------DAVSIMTLHSAKGLEFDTVFL 617

Query: 597 VGVEEGILPHCREDEDMSDEKIEEERRLMYVGITRAQRSLHLSWCKKRKRARDTYSCEPS 656
            G EEG+ PH R  ++     +EEERRL YVGITRA++  H+ +   R+      S  PS
Sbjct: 618 PGWEEGLFPHQRALDEGGRSGLEEERRLAYVGITRAKKLCHIWFVSNRRIHGLWQSTLPS 677

Query: 657 RFIGEM 662
           RF+ E+
Sbjct: 678 RFLDEL 683