Pairwise Alignments

Query, 117 a.a., hypothetical protein from Cupriavidus basilensis FW507-4G11

Subject, 107 a.a., amino acid ABC transporter permease from Cupriavidus basilensis FW507-4G11

 Score = 70.1 bits (170), Expect = 8e-18
 Identities = 36/77 (46%), Positives = 47/77 (61%), Gaps = 1/77 (1%)

Query: 31  VGKFDVYADALRAGKFDTFTDGAKASKFDTFTDGAKAGKFDTFTDGAKAG-KFDTFTDGA 89
           +G   + A A   GK D +T GAKA K D +TDGAKAGK D +TDGAKAG KFD +T GA
Sbjct: 13  LGAASIAAQAQGTGKVDPYTQGAKAGKADPYTDGAKAGKADPYTDGAKAGDKFDPYTQGA 72

Query: 90  RAAFSGDIAASSLDNSR 106
             +   ++  S    ++
Sbjct: 73  NKSSRANLTDSKAKKAK 89



 Score = 54.3 bits (129), Expect = 5e-13
 Identities = 28/54 (51%), Positives = 32/54 (59%)

Query: 38 ADALRAGKFDTFTDGAKASKFDTFTDGAKAGKFDTFTDGAKAGKFDTFTDGARA 91
          A AL  G            K D +T GAKAGK D +TDGAKAGK D +TDGA+A
Sbjct: 8  AFALCLGAASIAAQAQGTGKVDPYTQGAKAGKADPYTDGAKAGKADPYTDGAKA 61



 Score = 51.2 bits (121), Expect = 4e-12
 Identities = 35/87 (40%), Positives = 45/87 (51%), Gaps = 10/87 (11%)

Query: 4  KRILGGALAVLMVASSAVALAAPAN--------SKVGKFDVYADALRAGKFDTFTDGAKA 55
          K+I+  A A+ + A+S  A A            +K GK D Y D  +AGK D +TDGAKA
Sbjct: 2  KKIVATAFALCLGAASIAAQAQGTGKVDPYTQGAKAGKADPYTDGAKAGKADPYTDGAKA 61

Query: 56 -SKFDTFTDGAKAGKFDTFTDGAKAGK 81
            KFD +T GA        TD +KA K
Sbjct: 62 GDKFDPYTQGANKSSRANLTD-SKAKK 87