Pairwise Alignments

Query, 330 a.a., cobalamin biosynthesis protein CobD from Cupriavidus basilensis FW507-4G11

Subject, 276 a.a., Inner membrane protein AmpE from Pseudomonas putida KT2440

 Score = 67.4 bits (163), Expect = 4e-16
 Identities = 66/249 (26%), Positives = 109/249 (43%), Gaps = 22/249 (8%)

Query: 1   MTFVSVLLALIAEQFRALGRNNP-----IYDIVRVLAERAEHAFDTGRPRDTALAWFTVV 55
           M+F+ +LLAL  E+F AL          I ++VR+      H + T       LA   V+
Sbjct: 1   MSFLVLLLALWVEKFSALRHQVQRDGFFIGELVRLERNGKVHPWWT-------LA-ILVL 52

Query: 56  LPLTLTAMVVHYLLASISVALTLAWNVLLLYLTLGFRQFSHFFTDIHEALNRDDLPRARA 115
            P+ L  +++H L       L L  ++L+L  +LG            +A  R D   A  
Sbjct: 53  APVALLVLLLHVLEPVAYGLLALPVHLLVLIYSLGRGDAKASLGAFRDAWRRGDDQAALH 112

Query: 116 LLHQWTGLETIEMPVTEIVRHTLEAAIVAVHRHVFGVFFWFLVPIGPGGVVLYRIAEYLA 175
              +  GL   E P + +VR      +  V++  F V FW+ V +GPG  + YR+    +
Sbjct: 113 AAERDLGLVADE-PHSLLVR-VQGNLLWQVYQGFFAVIFWYFV-LGPGAALAYRLLALCS 169

Query: 176 RHWNIPSTDRSPALGRFAARAFYLLDWIPSRLTSVGFAIVGNFEDAVYAWRNHARKWNDA 235
            H       + PAL   A +  +++DW+P R  ++ FA+VGNF        +    W+ +
Sbjct: 170 EH------SKQPALKARAEQLRHIMDWLPVRALALSFALVGNFLAVTRVMLHEVLNWHIS 223

Query: 236 VNGILLASG 244
              ++   G
Sbjct: 224 AGHLVARVG 232