Pairwise Alignments

Query, 333 a.a., pseudouridine synthase from Cupriavidus basilensis FW507-4G11

Subject, 319 a.a., 23S rRNA pseudouridylate synthase from Pseudomonas simiae WCS417

 Score =  273 bits (698), Expect = 4e-78
 Identities = 149/294 (50%), Positives = 192/294 (65%), Gaps = 8/294 (2%)

Query: 19  PQVAYVTIGDEADGQRIDNFLLKLSKGVPKSHVYRILRSGEVRVNKGRVDATYRLQLGDV 78
           P V  + +  E  GQRIDNFLL   KGVPK+ +YRILR GEVRVNKGR+   Y+LQ GD+
Sbjct: 9   PSVQLLEVSPEYAGQRIDNFLLARLKGVPKTLIYRILRKGEVRVNKGRIKPEYKLQAGDI 68

Query: 79  VRIPPMRVAAS---APDAGKFVPPASFPVVFEDEYLLVINKPAGVAVHGGSGVAFGVIEQ 135
           VR+PP+RV       P A   +      ++FED  L+VINKP G+AVHGGSG+ FGVIE 
Sbjct: 69  VRVPPVRVPERDEPVPLAQGLLQRLEASIIFEDNKLIVINKPCGIAVHGGSGLNFGVIEA 128

Query: 136 LRRARPQARFLELVHRLDRETSGLLVLAKKRTALVNLHEQMRGSALDKRYFACVAGHFEN 195
            R+ RP A+ LELVHRLDR+TSGLL++AKKR+ L +LH  +RG  +DKRY A V G++ +
Sbjct: 129 FRQLRPDAKELELVHRLDRDTSGLLMIAKKRSMLRHLHTALRGDGVDKRYMALVRGNWAS 188

Query: 196 ARQHVKFPLYKYTTPEGERRVRVQEDGIASHTVFNRLEVMPGY-TLLEAELKTGRTHQIR 254
           + + V+ PL K     GER V V E+G  + T+F  L     + T++EA+  TGRTHQIR
Sbjct: 189 SIKSVRAPLQKSNLRSGERMVEVDEEGKEALTLFKVLRRFGDFATMVEAKPVTGRTHQIR 248

Query: 255 VHLAHSGFPILGDEKYGDYALNKALARSGANPGLKRMFLHAHSLTFTHPISGEI 308
           VH  H+G  I GD KYGD   +K +   G     KR+FLHA+ LT   P  GE+
Sbjct: 249 VHTLHAGHCIAGDTKYGDEDFSKEIRDLGG----KRLFLHAYMLTVPLPDGGEL 298