Pairwise Alignments

Query, 333 a.a., pseudouridine synthase from Cupriavidus basilensis FW507-4G11

Subject, 319 a.a., Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  291 bits (745), Expect = 1e-83
 Identities = 161/317 (50%), Positives = 209/317 (65%), Gaps = 8/317 (2%)

Query: 19  PQVAYVTIGDEADGQRIDNFLLKLSKGVPKSHVYRILRSGEVRVNKGRVDATYRLQLGDV 78
           P V  V I  +  GQRIDNFL    KGVPKS +YRILR GEVRVNK R+   Y+L+ GD 
Sbjct: 6   PSVKIVAIAADEAGQRIDNFLRTQLKGVPKSMIYRILRKGEVRVNKKRIKPEYKLEAGDE 65

Query: 79  VRIPPMRVA-----ASAPDAGKFVPPASFPVVFEDEYLLVINKPAGVAVHGGSGVAFGVI 133
           VRIPP+RVA     A +P   K    A   +++ED+++LV+NKP+G AVHGGSG++FGVI
Sbjct: 66  VRIPPVRVAEREEEAVSPHLQKVAALADV-ILYEDDHILVLNKPSGTAVHGGSGLSFGVI 124

Query: 134 EQLRRARPQARFLELVHRLDRETSGLLVLAKKRTALVNLHEQMRGSALDKRYFACVAGHF 193
           E LR  RP+ARFLELVHRLDR+TSG+L++AKKR+AL +LHEQ+R   + K Y A V G +
Sbjct: 125 EGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREKGMQKDYLALVRGQW 184

Query: 194 ENARQHVKFPLYKYTTPEGERRVRVQEDGIASHTVFNRLEVMPGYTLLEAELKTGRTHQI 253
           ++  + V+ PL K     GER VRV ++G  S T F   E     TL+     TGRTHQI
Sbjct: 185 QSHVKTVQAPLLKNILQSGERIVRVSQEGKPSETRFKVEERYAFATLVRCSPVTGRTHQI 244

Query: 254 RVHLAHSGFPILGDEKYGDYALNKALARSGANPGLKRMFLHAHSLTFTHPISGEITTVVA 313
           RVH  ++G PI  D++YGD   ++ L  +G   GLKR+FLHA +L FTHP +GE+  + A
Sbjct: 245 RVHTQYAGHPIAFDDRYGDREFDQQLTEAGT--GLKRLFLHAAALKFTHPGTGEVMRIEA 302

Query: 314 PMPPECEAFLQQARNQR 330
           PM    +  LQ  RN +
Sbjct: 303 PMDNALKRCLQVLRNAK 319