Pairwise Alignments

Query, 333 a.a., pseudouridine synthase from Cupriavidus basilensis FW507-4G11

Subject, 329 a.a., ribosomal large subunit pseudouridine synthase C from Agrobacterium fabrum C58

 Score =  146 bits (369), Expect = 6e-40
 Identities = 110/313 (35%), Positives = 158/313 (50%), Gaps = 23/313 (7%)

Query: 21  VAYVTIGDEADGQRIDNFLLKLSKGVPKSHVYRILRSGEVRVNKGRVDATYRLQLGDVVR 80
           + ++ +  +  G R+D +      G+    + ++LRSG+VRV+ GRV    R+Q G +VR
Sbjct: 4   IEHIKVEADEAGMRLDRWFKIHYPGLGFGQLQKLLRSGQVRVDGGRVKTDARVQPGQMVR 63

Query: 81  IPPM---RVAASAPDAGKFVPPASFP------VVFEDEYLLVINKPAGVAVHGGSGVAFG 131
           +PP+       + P   K +  ++        ++ ED+ +LV NKPAG+AV GGSGV   
Sbjct: 64  VPPVDSDMKTKTGPIGSKDLKHSADGELLARMLLHEDDKVLVFNKPAGIAVQGGSGVNRH 123

Query: 132 VIEQLRR-ARPQARFLELVHRLDRETSGLLVLAKKRTALVNLHEQMRGSALDKRYFACVA 190
           +   L     P+     LVHRLDR+TSG+LV+A+ R A   L    R     K Y+A V 
Sbjct: 124 IDGLLEAWTSPKGEKPRLVHRLDRDTSGVLVVARTRGAAQKLTAAFRERDTKKTYWALVR 183

Query: 191 GHFENARQHVKFPLYKYTTPEGER-RVRVQEDGIASHTV-FNRLEVMPGYTL--LEAELK 246
           G     +  +   L K  TP+G+R R+    +  A H + + R+       L  LE E  
Sbjct: 184 GVPRKHQDKISTWLVKEQTPDGDRMRIAKHGEEGADHAISYYRVIDTAAQNLAWLEMEPY 243

Query: 247 TGRTHQIRVHLAHSGFPILGDEKYGDYALNKALARSGANPG--LKRMFLHAHSLTFTHPI 304
           TGRTHQ+RVH  H G PI+GD KY     N         PG   KR+ LHA  +   HP 
Sbjct: 244 TGRTHQLRVHALHMGHPIIGDPKYYIDDPNWDF------PGGVQKRLHLHARHIDIPHPN 297

Query: 305 SGEITTVVAPMPP 317
            G +  V AP+PP
Sbjct: 298 GGRL-RVSAPLPP 309