Pairwise Alignments

Query, 295 a.a., ABC transporter permease from Cupriavidus basilensis FW507-4G11

Subject, 298 a.a., D-ala-D-ala transporter subunit (NCBI) from Escherichia coli BW25113

 Score =  196 bits (499), Expect = 4e-55
 Identities = 104/262 (39%), Positives = 162/262 (61%), Gaps = 1/262 (0%)

Query: 33  VAMLAALIVLALVLMAIFAPVLMPADPYAASIMKRLKPIGTEHYLLGTDELGRDLLSRLM 92
           + + +A+I++ ++LM IF+P L   DP A  +  RL P    H+  GTDE+GRDL SR++
Sbjct: 32  LTVTSAVIIVLMLLMMIFSPWLATHDPNAIDLTARLLPPSAAHWF-GTDEVGRDLFSRVL 90

Query: 93  LGARLSLFMGITPVLIAFVIGSALGIVAGYAGGWTNTVIMRLVDILYAFPSVLLAIALSG 152
           +G++ S+  G+  V IA +IGS LG ++G  GG  + +IMR++DI+ + PS++L +AL+ 
Sbjct: 91  VGSQQSILAGLVVVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPSLVLTMALAA 150

Query: 153 TLGAGVGNALLSLTIVFVPQIVRVAESVTTQVRNREFVDAARASGASSLTIVRAHVLNNV 212
            LG  + NA+L++ IV +P  VR+A      VR   +V AA+  GAS   ++  H+L N 
Sbjct: 151 ALGPSLFNAMLAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHLINWHILRNS 210

Query: 213 LGPIFVYATSLISVSMILASGLSFLGLGVKPPEPEWGLMLNTLRTAIYTQPLVAALPGAM 272
           L P+ V A+  I  ++++A+ L F+GLG + P  EWG M+   R  +  Q    A PGA 
Sbjct: 211 LPPLIVQASLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANGRNYVLDQWWYCAFPGAA 270

Query: 273 IFLTSISFNLLADGIRSAMEIK 294
           I LT++ FNL  DGIR  ++ K
Sbjct: 271 ILLTAVGFNLFGDGIRDLLDPK 292