Pairwise Alignments

Query, 734 a.a., helicase from Cupriavidus basilensis FW507-4G11

Subject, 714 a.a., putative Helicase from Pseudomonas putida KT2440

 Score =  222 bits (566), Expect = 4e-62
 Identities = 209/705 (29%), Positives = 321/705 (45%), Gaps = 91/705 (12%)

Query: 71  RPRAAQEQMAAAVAGAI---------ERAD---TVIVEAGTGTGKTFAY---LVPAMLWG 115
           +PR  Q  M A VA  +          RA     V VEAGTGTGKT AY    +PA    
Sbjct: 24  KPRYGQRLMIAEVAKVLGDIACDDEGRRAGEPAVVAVEAGTGTGKTVAYSLAAIPAAKAA 83

Query: 116 GK-VILSTGTKNLQDQLFLRDIPTVRKALNVPVSVALLKGRANYLCHYHLERAEIQGRLA 174
           GK ++++T T  LQ+Q+  +D+P + ++  +  S AL KGR  YLC   L+    +G   
Sbjct: 84  GKRLVIATATVALQEQIVFKDLPDLMRSSGLNFSFALAKGRGRYLCLSKLDILLQEGHAQ 143

Query: 175 S-----------------RQDAAWLREIARFAKVTSSGDKGELASVPENAPVWQLVTSTR 217
           S                 R    +   I + A     GD+       E+   W  +T+  
Sbjct: 144 SATAQLFEEEGFRIEVDERSQKLFNSMIEKLAGNRWDGDRDSWPEALEDQD-WARLTTDH 202

Query: 218 DNCMGTECPSYKECFVMRARKEAQQADIVVVNHHLFFADVVLRDTGMAELLPAANTV-IF 276
             C G  CP++++C   +AR+   + D++V NH +  AD+ L   G A L    +T+ +F
Sbjct: 203 SQCTGRHCPNFQQCVFYKAREGMGKVDVIVTNHDMVLADLALG--GGAVLPDPRDTMYVF 260

Query: 277 DEAHQLPDTATLFFGESL---STSQLLELARDTVAEGLSHARDAADWVRIAAPLERAARD 333
           DE H LPD A   F       ST+  LE     + + L+      D  +    +   AR+
Sbjct: 261 DEGHHLPDKAIGHFAHYSRLRSTADWLEQTAKNLTKLLAQHPLPGDLGKYIEQVPELARE 320

Query: 334 LRLAFTRDNSRLAVSQIEADPRIGKPFFETLDALETALAEFV--TLLESQAERAESLEQC 391
           +R   T+      + +  AD R      E  +  E     F    + E   E    L++ 
Sbjct: 321 VR---TQQQFMFTLCEQVADFRPS----EDTEGRERPRYRFEGGVVPEQIREVGIELKKG 373

Query: 392 HRRAVELDQRLAAWRS---DAKAAPPPAAVEGDEKAP-----------------ASTALG 431
             R  +L  RLA       D +     A+ + +E  P                 A TA  
Sbjct: 374 FARLNDLFTRLADLLKEGMDGEVNIGIASHQAEEWYPLFGSLVTRAQGNWELWTAFTAED 433

Query: 432 PET----VRWVEVFSQ----TVQLHRTPLSIAPIFTRQREGHPRAWIFTSATLSVKGNFT 483
           PE      RW+ +        ++++ +P+  A +  R         + TSATL+  G F 
Sbjct: 434 PEDSPPMARWLTLAESGALFDIEVNASPILAADMLRRSLWSVAHGALVTSATLTALGKFD 493

Query: 484 HYAAQLGLDKDK-SLTLPSPFDYATQGLLYVPRDLPAP--QSPQFTDAVVQTALPLIEAA 540
            +  + GL +D  +  +PSPF +   GLL VP DL A    +   T A+++    ++E A
Sbjct: 494 RFRMRSGLPRDAVTCVVPSPFVHGDAGLLRVP-DLQADPRDAAAHTAAIIRELPNIVEDA 552

Query: 541 GGRAFLLCTTLRAVQRASDLLYEAFAERGLELPLLVQGQASRTELLDRFR----ELGNAV 596
            G A +L ++ + +Q   D L     +R     +L+QG  S+ E L++ +    +  ++V
Sbjct: 553 RG-ALVLFSSRKQMQDVFDGL-----DRDWRKLVLIQGNLSKQETLNKHKARVDDGQHSV 606

Query: 597 LVGSQSFWEGVDVRGEALSLVIIDKLPFAPPDDPVLAARMEVLQRKGLSPFAVHQLPHAV 656
           L G  SF EGVD+ G     V+I K+PFA PDDPV AA  E ++ +G +PF    +P A 
Sbjct: 607 LFGLASFAEGVDLPGAYCEHVVIAKIPFAVPDDPVEAALAEWIEARGGNPFMEIAVPDAS 666

Query: 657 ITLKQGAGRLIRSESDRGVLVICDTRLVEKPYGRQIWQSLPPFKR 701
           + L Q  GRL+R+E DRGV+ + D RLV + YG+ I  +LPPF+R
Sbjct: 667 LKLIQACGRLLRTEQDRGVITLLDRRLVTQRYGKAILNALPPFRR 711