Pairwise Alignments

Query, 565 a.a., single-stranded DNA exonuclease from Cupriavidus basilensis FW507-4G11

Subject, 569 a.a., Single-stranded-DNA-specific exonuclease RecJ from Pseudomonas sp. RS175

 Score =  546 bits (1408), Expect = e-160
 Identities = 299/554 (53%), Positives = 381/554 (68%), Gaps = 14/554 (2%)

Query: 22  LHPTLARILSARGVREPAELATELPGLAPPAAMKGIDHAATYLADAIAAGRRLLIVADYD 81
           L P L R+ +ARGV+  AEL   L  L P   +KGID A   L  A+   +R+LIV D+D
Sbjct: 18  LPPLLTRLYAARGVQSEAELDKSLARLIPFQQLKGIDAAVDLLVAALEQRQRILIVGDFD 77

Query: 82  CDGATACAVGVRGLRMLGA-RIDYIVPNRFEYGYGLTPEIVALAARQQPDVIVTVDNGIA 140
            DGATA  VG+ GLR+LGA  +DY+VPNRFEYGYGLTPEIV +A  ++P +++TVDNGI+
Sbjct: 78  ADGATASTVGMLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVQVALAREPQLLITVDNGIS 137

Query: 141 SVDGVAAANALGIDVVVTDHHLPGDQLPDAAVIVNPNQPGCEFPSKNLAGVGVMFYVLLA 200
           SV+GVAAA A G+ V+VTDHHLPG +LP A  IVNPNQPGC+FPSK LAGVGV+FYVL+A
Sbjct: 138 SVEGVAAAKAAGLKVLVTDHHLPGPELPAADAIVNPNQPGCQFPSKALAGVGVIFYVLMA 197

Query: 201 LRAELRRRGVFDAQTQPRLDTLLDLVALGTVADVVKLDSNNRILVAQGLKRMRAGRMHAG 260
           LRA LR  G +    QP +  LLDLVALG+VADVV LD+NNRILV QGL+R+RAGR   G
Sbjct: 198 LRARLRSLGRYADTPQPNIGELLDLVALGSVADVVPLDANNRILVHQGLERIRAGRARPG 257

Query: 261 VAALFRAAGREATRANTFDLGFGVGPRLNAAGRLADMSLGIECLLTDDANRAWEIAQELD 320
           + A+   A R+ +R  + DLGF +GPRLNAAGRL DMSLGIECLLTDD N A ++A +LD
Sbjct: 258 IKAILEVARRDHSRITSTDLGFILGPRLNAAGRLDDMSLGIECLLTDDPNLARDMAAQLD 317

Query: 321 GMNRERRDIEAGMQQEAL-QILEGPLGALDPAARFTVSVFNDTWHQGVIGIVASRLKEKY 379
           GMN++R+ IE GMQ+EAL Q+ E P+ ++     F + +F+  WHQGVIGI+ASR+KE+Y
Sbjct: 318 GMNQDRKSIEQGMQREALAQLKELPVDSMP----FGLCLFDPQWHQGVIGILASRMKERY 373

Query: 380 HRPTITFAPGDEDTIKGSGRSIPGFHLRDALDLVSKRHPGLLKKFGGHAMAAGLTLGADS 439
            RPTI FA   +  +KGSGRS+PGFH+RDAL +V+ +HP L+ K+GGHAMAAGLTL   +
Sbjct: 374 FRPTIAFADAGDGLLKGSGRSVPGFHIRDALSVVAAQHPTLISKYGGHAMAAGLTLPEAN 433

Query: 440 FGQFMEAFEAVGREWLSDEQLARVIETDGDIEDACFSPEFVSLLEQQ-VWGQGFPAPTFC 498
           F  F EAF+A  R  L +E L   + +DG +    F  E    L     WGQ FP P F 
Sbjct: 434 FPLFAEAFDAEVRRQLREEDLTGRLLSDGTLAVEEFHLELARALRHAGPWGQHFPEPMFH 493

Query: 499 GEFDVLRQSVLKGKHLKLQLGR--GSQRFDAIWFNHADSLGASALV-----AYRLDNNTF 551
           G F ++ Q V+  +HLK+ L    GS + D I F     +  +  V     AY+LD N F
Sbjct: 494 GVFQLVEQRVVGERHLKVVLKSECGSVKLDGIAFGIDREVWPNPTVRWVELAYKLDLNEF 553

Query: 552 NGITRVQMVIEHAQ 565
            G   VQ++I H +
Sbjct: 554 RGQETVQLMIAHIE 567