Pairwise Alignments

Query, 565 a.a., single-stranded DNA exonuclease from Cupriavidus basilensis FW507-4G11

Subject, 577 a.a., Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  483 bits (1244), Expect = e-141
 Identities = 269/552 (48%), Positives = 352/552 (63%), Gaps = 12/552 (2%)

Query: 22  LHPTLARILSARGVREPAELATELPGLAPPAAMKGIDHAATYLADAIAAGRRLLIVADYD 81
           L P L R+ ++RGVR   EL   + G+ P   + GID+A   L +A   G R+++V D+D
Sbjct: 22  LPPLLRRLYASRGVRSARELERSVKGMLPWQQLSGIDNAVEILYNAFREGTRIIVVGDFD 81

Query: 82  CDGATACAVGVRGLRMLGA-RIDYIVPNRFEYGYGLTPEIVALAARQQPDVIVTVDNGIA 140
            DGAT+ A+ V G+R LG   I Y+VPNRFE GYGL+PE+V  A  +   +IVTVDNGI+
Sbjct: 82  ADGATSTALSVLGMRALGCDNISYLVPNRFEDGYGLSPEVVDQAKARGAQLIVTVDNGIS 141

Query: 141 SVDGVAAANALGIDVVVTDHHLPGDQLPDAAVIVNPNQPGCEFPSKNLAGVGVMFYVLLA 200
           S  GVA A  LGI V+VTDHHLPGD LPDA  I+NPN   CEFPSK+LAGVGV FY++LA
Sbjct: 142 SHAGVAHAKTLGIPVIVTDHHLPGDTLPDAEAIINPNLRDCEFPSKSLAGVGVAFYLMLA 201

Query: 201 LRAELRRRGVFDAQ--TQPRLDTLLDLVALGTVADVVKLDSNNRILVAQGLKRMRAGRMH 258
           LR  LR +G FD +    P L  LLDLVALGTVADVV LD+NNRIL  QGL R+RAG+  
Sbjct: 202 LRTFLRDKGWFDERNIAPPNLAELLDLVALGTVADVVPLDANNRILTWQGLSRIRAGKCR 261

Query: 259 AGVAALFRAAGREATRANTFDLGFGVGPRLNAAGRLADMSLGIECLLTDDANRAWEIAQE 318
            G+ AL   + R+  +    DLGF +GPRLNAAGRL DMS+G+  LL D+   A  +A E
Sbjct: 262 PGIKALLEISNRDPQQLAASDLGFALGPRLNAAGRLDDMSVGVALLLCDNLGEARVLASE 321

Query: 319 LDGMNRERRDIEAGMQQEALQILEGPLGALDPAARFTVSVFNDTWHQGVIGIVASRLKEK 378
           LD +N+ R++IE GMQ EAL + E  L          +++++  WHQGV+GI+ASR+KE+
Sbjct: 322 LDALNQTRKEIEQGMQAEALILCE-KLERSSETLPGGLAMYHPEWHQGVVGILASRIKER 380

Query: 379 YHRPTITFAPGDEDTIKGSGRSIPGFHLRDALDLVSKRHPGLLKKFGGHAMAAGLTLGAD 438
           +HRP I FAP  + T+KGSGRSI G H+RDAL+ +   +P L+ KFGGHAMAAGL+L   
Sbjct: 381 FHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYPDLMIKFGGHAMAAGLSLEEH 440

Query: 439 SFGQFMEAFEAVGREWLSDEQLARVIETDGDIEDACFSPEFVSLL-EQQVWGQGFPAPTF 497
            F QF + F  +  EWL    L   + +DG +  A  S E   LL +   WGQ FP P F
Sbjct: 441 KFEQFQQRFGELVTEWLDPALLQGEVISDGPLSAAEMSMEVAQLLRDAGPWGQMFPEPLF 500

Query: 498 CGEFDVLRQSVLKGKHLKLQLG--RGSQRFDAIWFN-----HADSLGASALVAYRLDNNT 550
            G F +L+Q ++  +HLK+ +    G    D I FN       D+      +AY+LD N 
Sbjct: 501 DGRFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNIDTTCWPDNGVREVELAYKLDINE 560

Query: 551 FNGITRVQMVIE 562
           F G   +Q++I+
Sbjct: 561 FRGNRSLQIIID 572