Pairwise Alignments

Query, 565 a.a., single-stranded DNA exonuclease from Cupriavidus basilensis FW507-4G11

Subject, 572 a.a., single-stranded-DNA-specific exonuclease RecJ from Erwinia amylovora T8

 Score =  485 bits (1248), Expect = e-141
 Identities = 270/551 (49%), Positives = 355/551 (64%), Gaps = 13/551 (2%)

Query: 22  LHPTLARILSARGVREPAELATELPGLAPPAAMKGIDHAATYLADAIAAGRRLLIVADYD 81
           LHP L R+ + RGV    EL      L P  ++ GID A T L  A+     ++IV D+D
Sbjct: 22  LHPLLRRLYAHRGVSRACELERGARNLHPFQSLSGIDQAVTILQKALLDNLCIMIVGDFD 81

Query: 82  CDGATACAVGVRGLRMLGAR-IDYIVPNRFEYGYGLTPEIVALAARQQPDVIVTVDNGIA 140
            DGAT+ A+ V  LR +GA+ + Y+VPNRF+ GYGL+PE+V  AA +   +IVTVDNGI+
Sbjct: 82  ADGATSTALTVLSLRGMGAQNVKYLVPNRFDDGYGLSPEVVEQAAVRGAQLIVTVDNGIS 141

Query: 141 SVDGVAAANALGIDVVVTDHHLPGDQLPDAAVIVNPNQPGCEFPSKNLAGVGVMFYVLLA 200
           S+ GVA A+  GI V+VTDHHLPG+ LPDA  IVNPN   C FPS+ LAGVGV FY++LA
Sbjct: 142 SLAGVALAHQKGIAVIVTDHHLPGEILPDADAIVNPNLSDCAFPSRALAGVGVAFYLMLA 201

Query: 201 LRAELRRRGVFDAQTQPRLDTLLDLVALGTVADVVKLDSNNRILVAQGLKRMRAGRMHAG 260
           LRA LR  GV    T P L  LLDLVALGTVADVV LD+NNRILV QGL R+RAG+   G
Sbjct: 202 LRARLRDDGV---NTLPNLAELLDLVALGTVADVVPLDANNRILVWQGLSRIRAGKCRPG 258

Query: 261 VAALFRAAGREATRANTFDLGFGVGPRLNAAGRLADMSLGIECLLTDDANRAWEIAQELD 320
           + AL   A R+A +    DLGF +GPRLNAAGRL DMS+G+  LL++D  +A  +A ELD
Sbjct: 259 IRALLEIANRDARQLAASDLGFTLGPRLNAAGRLDDMSVGVALLLSEDLAQARMLASELD 318

Query: 321 GMNRERRDIEAGMQQEALQILEGPLGALDPAARFTVSVFNDTWHQGVIGIVASRLKEKYH 380
            +N+ R++IE GMQ EAL +    L +   A    +++++  WHQGV+GI+ASRLKE++H
Sbjct: 319 ALNQTRKEIEQGMQSEALTLC-NRLESASEALPLGIAMYHPEWHQGVVGILASRLKERFH 377

Query: 381 RPTITFAPGDEDTIKGSGRSIPGFHLRDALDLVSKRHPGLLKKFGGHAMAAGLTLGADSF 440
           RP I FAP  +  +KGSGRSI G H+RD L+ +   HPGL+ KFGGHAMAAGL+L    F
Sbjct: 378 RPVIAFAPAGDGMLKGSGRSIAGLHMRDVLERLDTLHPGLIVKFGGHAMAAGLSLQEAKF 437

Query: 441 GQFMEAFEAVGREWLSDEQLARVIETDGDI-EDACFSPEFVSLLEQQVWGQGFPAPTFCG 499
            +F + F  +  +WL  E L  V+ +DG++       P    L +   WGQ FP PTF G
Sbjct: 438 DEFRQRFADLVGDWLDAESLQGVVWSDGELMAQELTLPTAELLRDAGPWGQAFPEPTFDG 497

Query: 500 EFDVLRQSVLKGKHLKLQLG--RGSQRFDAIWFNHADSLGASALV-----AYRLDNNTFN 552
           +F +L+Q ++  +HLK+ +    G    D I FN   +L     V     AY+LD N + 
Sbjct: 498 KFKLLQQRLVGERHLKVMVEPLGGGPLLDGIAFNVDTALWPDPAVKQVELAYKLDVNEYR 557

Query: 553 GITRVQMVIEH 563
           G   VQ++I+H
Sbjct: 558 GNRNVQLIIDH 568