Pairwise Alignments

Query, 565 a.a., single-stranded DNA exonuclease from Cupriavidus basilensis FW507-4G11

Subject, 589 a.a., single-stranded-DNA-specific exonuclease RecJ from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  266 bits (681), Expect = 1e-75
 Identities = 183/592 (30%), Positives = 297/592 (50%), Gaps = 58/592 (9%)

Query: 6   VRSFSTEHAGKLAGFGLHPTLARILSARGVREPAE----LATELPGLAPPAAMKGIDHAA 61
           V+S S+E         ++PTLA +L+ R V    E       +L  +  P  MK +D A 
Sbjct: 16  VQSLSSE-------INVNPTLANLLANRKVTSFQEAKDFFRPDLDKIHSPFLMKDMDKAV 68

Query: 62  TYLADAIAAGRRLLIVADYDCDGATACAVGVRGLRMLGARIDYIVPNRFEYGYGLTPEIV 121
             L  AI    ++L+  DYD DG TA A+    L  +   +D+ +P+R++ GYG++   V
Sbjct: 69  DRLVQAIEQEEKILVYGDYDVDGTTAVALFYGFLSSVYPHVDFYIPDRYQEGYGVSERGV 128

Query: 122 ALAARQQPDVIVTVDNGIASVDGVAAANALGIDVVVTDHHLPGDQLPDAAVIVNPNQPGC 181
             AA     +IV++D GI +++ VA AN+LG+D ++ DHH PGD+LP A  +++P +  C
Sbjct: 129 RYAAENGFRLIVSLDCGIKAIEKVALANSLGVDFIICDHHTPGDELPHALAVLDPKRKDC 188

Query: 182 EFPSKNLAGVGVMFYVLLALRAELRRRGVFDAQTQPRLDTLLDLVALGTVADVVKLDSNN 241
            +P K L+G GV F ++ A   +         +    L  LLDLVA+   AD+V +   N
Sbjct: 189 TYPYKELSGCGVGFKLIQAFTEK-------TGKNASHLFGLLDLVAVSIAADIVPITGEN 241

Query: 242 RILVAQGLKRMRAGRMHAGVAALFRAAGREATR---------------------ANTFDL 280
           RIL   GL+R+        +A +    G+ + +                      +  D+
Sbjct: 242 RILAHYGLERLNNNPRPGLMALILAGKGQRSLQELLENRQLLQREMLQLKSDKDIDISDI 301

Query: 281 GFGVGPRLNAAGRLADMSLGIECLLTDDANRAWEIAQELDGMNRERRDIEAGMQQEALQI 340
            F +GPR+NA+GRL      +E L++ D + A   A+ ++ +N  R++ +  + +EA+Q+
Sbjct: 302 VFRIGPRINASGRLEHAKASVELLISQDIHDALRRAEVVEDVNAARKNFDENITKEAIQM 361

Query: 341 LEGPLGALDPAARFTVSVFNDTWHQGVIGIVASRLKEKYHRPTITFAPGDEDTIKGSGRS 400
           +E      D   + TV ++ + WH+GVIGIVASR  E+Y+RPTI     + +   GS RS
Sbjct: 362 IED--REQDKPYKSTV-LYKEDWHKGVIGIVASRCIEQYYRPTIILTESN-NKATGSARS 417

Query: 401 IPGFHLRDALDLVSKRHPGLLKKFGGHAMAAGLTLGADSFGQFMEAFEAVGREWLSDEQL 460
           +  F + +A+   S     LL++FGGH  AAGLT+  D    F   FE V    ++D   
Sbjct: 418 VYDFDIYEAISECS----DLLEQFGGHKYAAGLTMELDKVPAFQARFEEVVTRRIADIHT 473

Query: 461 ARVIETDGDIEDACFSPEFVSLLEQQV-WGQGFPAPTFCGEFDVLRQS--VLKGKHLKLQ 517
             V+E D ++E    + +F ++L Q   +G G   P FC    V  Q+  VLK KHLK +
Sbjct: 474 KPVLEVDDELELDQINYKFYNILRQMAPFGPGNTEPIFCAN-QVYAQNIKVLKDKHLKFE 532

Query: 518 LGRGSQRFDAIWFNHADSLGASAL-------VAYRLDNNTFNGITRVQMVIE 562
           + +  Q    +      +     L       +A+ +  NTF   + +Q+ ++
Sbjct: 533 IVQDGQVTSPVCIAFGFATYYEMLRSKMRFNIAFEVRENTFRNTSSLQLYVK 584