Pairwise Alignments

Query, 565 a.a., single-stranded DNA exonuclease from Cupriavidus basilensis FW507-4G11

Subject, 577 a.a., ssDNA exonuclease, 5 from Escherichia coli BL21

 Score =  478 bits (1229), Expect = e-139
 Identities = 263/553 (47%), Positives = 354/553 (64%), Gaps = 12/553 (2%)

Query: 22  LHPTLARILSARGVREPAELATELPGLAPPAAMKGIDHAATYLADAIAAGRRLLIVADYD 81
           L P L R+ ++RGVR   EL   + G+ P   + G++ A   L +A   G R+++V D+D
Sbjct: 22  LPPLLRRLYASRGVRSAQELERSVKGMLPWQQLSGVEKAVEILYNAFREGTRIIVVGDFD 81

Query: 82  CDGATACAVGVRGLRMLG-ARIDYIVPNRFEYGYGLTPEIVALAARQQPDVIVTVDNGIA 140
            DGAT+ A+ V  +R LG + IDY+VPNRFE GYGL+PE+V  A  +   +IVTVDNGI+
Sbjct: 82  ADGATSTALSVLAMRSLGCSNIDYLVPNRFEDGYGLSPEVVDQAHARGAQLIVTVDNGIS 141

Query: 141 SVDGVAAANALGIDVVVTDHHLPGDQLPDAAVIVNPNQPGCEFPSKNLAGVGVMFYVLLA 200
           S  GV  A +LGI V+VTDHHLPG+ LP A  I+NPN   C FPSK+LAGVGV FY++LA
Sbjct: 142 SHAGVEHARSLGIPVIVTDHHLPGETLPAAEAIINPNLRDCNFPSKSLAGVGVAFYLMLA 201

Query: 201 LRAELRRRGVFDAQ--TQPRLDTLLDLVALGTVADVVKLDSNNRILVAQGLKRMRAGRMH 258
           LR  LR +G FD +    P L  LLDLVALGTVADVV LD+NNRIL  QG+ R+RAG+  
Sbjct: 202 LRTFLRDQGWFDERGIAIPNLAELLDLVALGTVADVVPLDANNRILTWQGMSRIRAGKCR 261

Query: 259 AGVAALFRAAGREATRANTFDLGFGVGPRLNAAGRLADMSLGIECLLTDDANRAWEIAQE 318
            G+ AL   A R+A +    DLGF +GPRLNAAGRL DMS+G+  LL D+   A  +A E
Sbjct: 262 PGIKALLEVANRDAQKLAASDLGFALGPRLNAAGRLDDMSVGVALLLCDNIGEARVLANE 321

Query: 319 LDGMNRERRDIEAGMQQEALQILEGPLGALDPAARFTVSVFNDTWHQGVIGIVASRLKEK 378
           LD +N+ R++IE GMQ EAL + E    + D      +++++  WHQGV+GI+ASR+KE+
Sbjct: 322 LDALNQTRKEIEQGMQVEALTLCEKLERSRDTLPG-GLAMYHPEWHQGVVGILASRIKER 380

Query: 379 YHRPTITFAPGDEDTIKGSGRSIPGFHLRDALDLVSKRHPGLLKKFGGHAMAAGLTLGAD 438
           +HRP I FAP  + T+KGSGRSI G H+RDAL+ +   +PG++ KFGGHAMAAGL+L  D
Sbjct: 381 FHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYPGMILKFGGHAMAAGLSLEED 440

Query: 439 SFGQFMEAFEAVGREWLSDEQLARVIETDGDIEDACFSPEFVSLL-EQQVWGQGFPAPTF 497
            F  F + F  +  EWL    L   + +DG +  A  + E   LL +   WGQ FP P F
Sbjct: 441 KFELFQQRFGELVTEWLDPSLLQGEVVSDGPLSPAEMTMEVAQLLRDAGPWGQMFPEPLF 500

Query: 498 CGEFDVLRQSVLKGKHLKLQLG--RGSQRFDAIWFN-----HADSLGASALVAYRLDNNT 550
            G F +L+Q ++  +HLK+ +    G    D I FN       D+      +AY+LD N 
Sbjct: 501 DGHFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNVDTALWPDNGVREVQLAYKLDINE 560

Query: 551 FNGITRVQMVIEH 563
           F G   +Q++I++
Sbjct: 561 FRGNRSLQIIIDN 573