Pairwise Alignments

Query, 562 a.a., RNA helicase from Cupriavidus basilensis FW507-4G11

Subject, 444 a.a., DEAD/DEAH box helicase from Pseudomonas simiae WCS417

 Score =  410 bits (1054), Expect = e-119
 Identities = 223/449 (49%), Positives = 306/449 (68%), Gaps = 20/449 (4%)

Query: 1   MSFSELGLSDKLMRAVAEQGYTTPTPIQAQAIPAILKGGDLLAGAQTGTGKTAGFTLPLL 60
           M+F+ LGL + L+RA+   GY TPTP+QAQAIPA+L G DL+A AQTGTGKTAGF +PLL
Sbjct: 1   MTFATLGLIEPLLRALETLGYQTPTPVQAQAIPAVLAGRDLMAAAQTGTGKTAGFAVPLL 60

Query: 61  QLLSESSAGREPARGQRLPVRALVLTPTRELAAQVEESVRNYGKYLKLRSMVMFGGVGIN 120
           QLL+      E  +      RAL+L PTRELA QV  SV  Y + L L +  ++GGV IN
Sbjct: 61  QLLT-----MEGPKVAANSARALILCPTRELAEQVHASVAEYAQNLPLTTYAVYGGVSIN 115

Query: 121 PQIEQLKRGVDIVVATPGRLLDHLSQRTIDLAHVEMLVLDEADRMLDMGFIHDIRKILNV 180
           PQ+ +L++GVDI+VATPGRL+D   Q  + L  ++ LVLDEADRMLD+GF  ++  I  +
Sbjct: 116 PQMMKLRKGVDILVATPGRLIDLFRQNALKLNQLQTLVLDEADRMLDLGFSEELANIYRM 175

Query: 181 LPPKRQNLLFSATFSDEIRGLADRLLDNPASIEVARRNTTAETVAQRVYPVDRERKRELL 240
           LP KRQ LLFSATFSD+IR LA ++L++P SIEV+ RN  A TV Q V PVD++RK EL 
Sbjct: 176 LPKKRQTLLFSATFSDDIRLLAGQMLNDPLSIEVSPRNVAANTVKQWVVPVDKKRKPELF 235

Query: 241 AHLVRENDWHQVLVFTRTKHGANRLAEQLDKDGLSALAIHGNKSQSARTRALTEFKAGTL 300
            HL+R+  W QVLVF +T++G + L ++L   G++A  IHG+K Q+ R RAL  FK+  +
Sbjct: 236 VHLMRKGRWKQVLVFAKTRNGVDALVDKLQGLGINADGIHGDKPQATRQRALDRFKSSEV 295

Query: 301 RLLVATDIAARGIDIDQLPHVVNYDLPNVPEDYVHRIGRTGRAGAEGEAISLVCVDEISL 360
           ++LVATD+AARG+DI+ LP VVN+DLP V EDY+HRIGRTGRAG  GEAISLVC DE+++
Sbjct: 296 QILVATDVAARGLDIEDLPLVVNFDLPIVAEDYIHRIGRTGRAGNTGEAISLVCADEVNM 355

Query: 361 MRDIERLIKRQIEQTILPGFEVDPSIP-----AEPIQKGRQ-ARGQGQGNGGGRGRGQ-- 412
           +  IE L ++ + + +   FE +  +P      + ++K ++  + +  G GG R  G+  
Sbjct: 356 LSAIEMLTRQTLTRHMEQDFEPEHRVPDTDASGQVVKKPKKPKKPKSSGGGGKRNLGKWV 415

Query: 413 -----APA--GGQPRGRAPAADAGERQQR 434
                APA    +P  + P  + G R+++
Sbjct: 416 DSGEVAPAEPSIKPVRKVPVFNTGPRKKK 444