Pairwise Alignments

Query, 562 a.a., RNA helicase from Cupriavidus basilensis FW507-4G11

Subject, 608 a.a., ATP-dependent RNA helicase RhlE from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  529 bits (1362), Expect = e-154
 Identities = 301/565 (53%), Positives = 375/565 (66%), Gaps = 32/565 (5%)

Query: 1   MSFSELGLSDKLMRAVAEQGYTTPTPIQAQAIPAILKGGDLLAGAQTGTGKTAGFTLPLL 60
           M+F +L L+  +++AV E GY TPTPIQ +AIPA+L G DLL GAQTGTGKTA FTLP+L
Sbjct: 15  MTFDDLNLAPAIVQAVREHGYETPTPIQVEAIPAVLAGRDLLGGAQTGTGKTAAFTLPML 74

Query: 61  QLLSESSAGREPARGQRLPVRALVLTPTRELAAQVEESVRNYGKYLKLRSMVMFGGVGIN 120
             L+ S   R  +R   + +RALVLTPTRELAAQVEESVR YGK+L L S V+FGGVG+N
Sbjct: 75  HRLANSE--RAKSRFGGVGIRALVLTPTRELAAQVEESVRVYGKHLSLTSTVVFGGVGMN 132

Query: 121 PQIEQLKRGVDIVVATPGRLLDHLSQRTIDLAHVEMLVLDEADRMLDMGFIHDIRKILNV 180
           PQI  +KRGVDI+VATPGRLLD   Q  +DL+ V+MLVLDEADRMLDMGFIHD++KIL +
Sbjct: 133 PQINAMKRGVDILVATPGRLLDLQQQGFLDLSTVQMLVLDEADRMLDMGFIHDVKKILAL 192

Query: 181 LPPKRQNLLFSATFSDEIRGLADRLLDNPASIEVARRNTTAETVAQRVYPVDRERKRELL 240
           +P ++Q+LLFSATFSDEIR LA  LL +P  I+V  RNTT + + Q ++PV R +K+ LL
Sbjct: 193 VPKEKQSLLFSATFSDEIRDLASALLKDPLHIQVTPRNTTVQRITQVIHPVGRGKKKALL 252

Query: 241 AHLVRENDWHQVLVFTRTKHGANRLAEQLDKDGLSALAIHGNKSQSARTRALTEFKAGTL 300
            H++ +++W QVLVFTRTK GAN +AE L K+G+ A+A+HGNKSQ ART+AL  FK+G +
Sbjct: 253 VHIINQHNWSQVLVFTRTKFGANNVAEYLTKNGIHAMALHGNKSQGARTQALAGFKSGEI 312

Query: 301 RLLVATDIAARGIDIDQLPHVVNYDLPNVPEDYVHRIGRTGRAGAEGEAISLVCVDEISL 360
           R LVATDIAARGIDID+LPHVVNY++PN+ EDYVHRIGRTGRAG  GEA++LV +DE   
Sbjct: 313 RALVATDIAARGIDIDELPHVVNYEIPNISEDYVHRIGRTGRAGNSGEAVNLVSLDEEGF 372

Query: 361 MRDIERLIKRQIEQTILPGFEVDPSIPAEPIQKGRQARGQGQGNGGGRGRGQAPAGGQPR 420
           M +IER  K+QI   I P F  +P   AEPI  GRQ    G G    R    A A     
Sbjct: 373 MMEIERFTKQQIPVQIFPEFMPEPGEKAEPIAMGRQTIWGGAGKPPSREVMAAAA----- 427

Query: 421 GRAPAADAGER-QQRPARAPQGRGQAPAAADGQGQRRAPQAPGQRPAQGSGRPASAGQGN 479
            +A   +  +R +++ A  PQGRG       G GQR       QRPA G G  A   +G 
Sbjct: 428 -KAARTEMLQRVREKKANEPQGRGN----GGGGGQR-------QRPA-GDGSQADGPRGE 474

Query: 480 PRNGQANGNRTGEANGNRAAGNGNGNGNGNGNGNRDRN--GDVNGNRAGVNTHAAQPRTG 537
            R G   G R   ANGN   GNG   G  +G G + +    +  G R         PR  
Sbjct: 475 GRRGNGGGQR---ANGNGGGGNGQRQGQRHGGGQQGQRPPREDRGFR-----EDRGPREE 526

Query: 538 QDPARGRRPAPQAALLGGQRAKPTR 562
           ++P   R+P P A  LG  R +  R
Sbjct: 527 REPGAERQPGPNAH-LGSLRIREPR 550