Pairwise Alignments

Query, 562 a.a., RNA helicase from Cupriavidus basilensis FW507-4G11

Subject, 476 a.a., ATP-dependent helicase from Magnetospirillum magneticum AMB-1

 Score =  421 bits (1081), Expect = e-122
 Identities = 244/506 (48%), Positives = 313/506 (61%), Gaps = 40/506 (7%)

Query: 3   FSELGLSDKLMRAVAEQGYTTPTPIQAQAIPAILKGGDLLAGAQTGTGKTAGFTLPLLQL 62
           FSELGL++ L++A+  +GYTTPTPIQ Q+IP +L+G D+L  AQTGTGKTA F LPLLQ 
Sbjct: 5   FSELGLAEPLLKALEAEGYTTPTPIQEQSIPHLLQGSDVLGLAQTGTGKTASFALPLLQR 64

Query: 63  LSESSAGREPARGQRLPVRALVLTPTRELAAQVEESVRNYGKYLKLRSMVMFGGVGINPQ 122
           L +      P        R LVLTPTRELA QV +S + YG + +LR  ++FGGVG+ PQ
Sbjct: 65  LDQFKKRAMPKS-----CRILVLTPTRELAVQVGQSFKTYGCHYRLRHALVFGGVGMVPQ 119

Query: 123 IEQLKRGVDIVVATPGRLLDHLSQRTIDLAHVEMLVLDEADRMLDMGFIHDIRKILNVLP 182
           I+ +  GVD++VATPGRLLD + Q  I L  VE LVLDEADRMLDMGFI  IRKI+ ++P
Sbjct: 120 IKTMAGGVDVLVATPGRLLDLIEQGAIRLDSVEALVLDEADRMLDMGFIQPIRKIVALVP 179

Query: 183 PKRQNLLFSATFSDEIRGLADRLLDNPASIEVARRNTTAETVAQRVYPVDRERKRELLAH 242
            +RQ +LFSAT  D I GLA+ +L  P  +EV   ++T + + Q+V  VDRE KR LL  
Sbjct: 180 KQRQTVLFSATMPDSIVGLANSVLHTPVRVEVTPVSSTVDKIDQKVLFVDREHKRTLLTD 239

Query: 243 LVRENDWHQVLVFTRTKHGANRLAEQLDKDGLSALAIHGNKSQSARTRALTEFKAGTLRL 302
           ++   D  + LVFTRTKHGANR+ E L+K G+ A AIHGNKSQ AR +AL +F+ G ++ 
Sbjct: 240 ILAGKDVGRALVFTRTKHGANRVVELLEKAGIDADAIHGNKSQGARQKALADFRDGRIKA 299

Query: 303 LVATDIAARGIDIDQLPHVVNYDLPNVPEDYVHRIGRTGRAGAEGEAISLVCVDEISLMR 362
           LVATDIAARGID+D + HV+N++LPN PE YVHRIGRT RAGA G A+SL   DE++ +R
Sbjct: 300 LVATDIAARGIDVDGITHVINFELPNEPESYVHRIGRTARAGASGIALSLCDGDEVAYLR 359

Query: 363 DIERLIKRQI----EQTILPGFEVDPSIPAEPIQKGRQARGQGQGNGGGRGRGQAPAGGQ 418
           DIE+ I++ I    EQ           +P  P    R  +      GGG+G  Q   GG 
Sbjct: 360 DIEKTIRQAIPVDYEQPYHAAHIATRGLPGGP----RATKPPQPHRGGGKGHPQQSRGGN 415

Query: 419 PRGRAPAADAGERQQRPARAPQGRGQAPAAADGQGQRRAPQAPGQRPAQGSGRPASAGQ- 477
           P         GE    PA+   G               A      +PA  SGRPA+AG+ 
Sbjct: 416 PH--------GEHGAHPAKGRDG---------------AKHTHAGKPA--SGRPAAAGKP 450

Query: 478 -GNPRNGQANGNRTGEANGNRAAGNG 502
            G P   +  G   G   G+R+A  G
Sbjct: 451 AGKPGGARPQGGFKGMPGGSRSAARG 476