Pairwise Alignments

Query, 562 a.a., RNA helicase from Cupriavidus basilensis FW507-4G11

Subject, 454 a.a., RNA helicase (NCBI) from Escherichia coli BW25113

 Score =  573 bits (1478), Expect = e-168
 Identities = 299/462 (64%), Positives = 361/462 (78%), Gaps = 13/462 (2%)

Query: 1   MSFSELGLSDKLMRAVAEQGYTTPTPIQAQAIPAILKGGDLLAGAQTGTGKTAGFTLPLL 60
           MSF  LGLS  ++RAVAEQGY  PTPIQ QAIPA+L+G DL+A AQTGTGKTAGFTLPLL
Sbjct: 1   MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60

Query: 61  QLLSESSAGREPARGQRLPVRALVLTPTRELAAQVEESVRNYGKYLKLRSMVMFGGVGIN 120
           Q L      R+P    R PVRAL+LTPTRELAAQ+ E+VR+Y KYL +RS+V+FGGV IN
Sbjct: 61  QHLIT----RQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSIN 116

Query: 121 PQIEQLKRGVDIVVATPGRLLDHLSQRTIDLAHVEMLVLDEADRMLDMGFIHDIRKILNV 180
           PQ+ +L+ GVD++VATPGRLLD   Q  + L  VE+LVLDEADRMLDMGFIHDIR++L  
Sbjct: 117 PQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTK 176

Query: 181 LPPKRQNLLFSATFSDEIRGLADRLLDNPASIEVARRNTTAETVAQRVYPVDRERKRELL 240
           LP KRQNLLFSATFSD+I+ LA++LL NP  IEVARRNT ++ V Q V+ VD++RKRELL
Sbjct: 177 LPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELL 236

Query: 241 AHLVRENDWHQVLVFTRTKHGANRLAEQLDKDGLSALAIHGNKSQSARTRALTEFKAGTL 300
           +H++ + +W QVLVFTRTKHGAN LAEQL+KDG+ + AIHGNKSQ ARTRAL +FK+G +
Sbjct: 237 SHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDI 296

Query: 301 RLLVATDIAARGIDIDQLPHVVNYDLPNVPEDYVHRIGRTGRAGAEGEAISLVCVDEISL 360
           R+LVATDIAARG+DI++LPHVVNY+LPNVPEDYVHRIGRTGRA A GEA+SLVCVDE  L
Sbjct: 297 RVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKL 356

Query: 361 MRDIERLIKRQIEQTILPGFEVDPSIPAEPIQKGRQAR-GQGQGNGGGRGRGQAPAGGQP 419
           +RDIE+L+K++I +  +PG+E DPSI AEPIQ GRQ R G G+G GGGRG+ Q   G   
Sbjct: 357 LRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRG--- 413

Query: 420 RGRAPAADAGERQQRPARAPQGRGQAPAAADGQGQRRAPQAP 461
            G A +A A     +PA  P  R      A  Q +RR P+ P
Sbjct: 414 EGGAKSASA-----KPAEKPSRRLGDAKPAGEQQRRRRPRKP 450