Pairwise Alignments

Query, 250 a.a., branched-chain amino acid ABC transporter permease from Cupriavidus basilensis FW507-4G11

Subject, 245 a.a., predicted transporter (NCBI) from Escherichia coli BW25113

 Score = 95.9 bits (237), Expect = 7e-25
 Identities = 63/221 (28%), Positives = 108/221 (48%), Gaps = 16/221 (7%)

Query: 20  GVRALAPMLLGVAPFGLIYGVLAVNAGMPAWLACAMSAIVFGGASQMILTQLWAAGTPAV 79
           G +   P+++   P    +G+ A   G     +   S I++ GASQ ++T + AAG+   
Sbjct: 18  GCKDSLPIVISYIPVAFAFGLNATRLGFSPLESVFFSCIIYAGASQFVITAMLAAGSSLW 77

Query: 80  LIAVTVAMVNLRHALYSATM-APALAHLPGRWKALISYLLTDEAFAAMTRRLSDDDEHKR 138
           + A+TV  +++RH LY  ++ +  +  L     AL ++ LTDE FAA T +L  +  ++R
Sbjct: 78  IAALTVMAMDVRHVLYGPSLRSRIIQRLQKSKTALWAFGLTDEVFAAATAKLVRN--NRR 135

Query: 139 YRHWFFFGAGFALWASWQVSTLAGVLVGAQIPRDWP-----LDFFLPLTFIAIIVPGIKR 193
           +   +  G  F+ W+SW   T+ G   G+ + + +P     L F LP  F++ ++   +R
Sbjct: 136 WSENWMIGIAFSSWSSWVFGTVIGAFSGSGLLQGYPAVEAALGFMLPALFMSFLLASFQR 195

Query: 194 RSH--AAAALAATALAVACYGMPHKLGLMVAALGGIAAGML 232
           +      AAL      V  + +P      VA L GI  G L
Sbjct: 196 KQSLCVTAALVGALAGVTLFSIP------VAILAGIVCGCL 230